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SCNpilot_expt_500_p_scaffold_1967_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1967_curated_1
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(2..3400)
DNA (3399bp) protein (1133aa)
Putative PAS/PAC sensor protein n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UK79_9CYAN
Putative PAS/PAC sensor protein n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UK79_9CYAN
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:EGK86185.1}; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatus FGP-2.;"
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:EGK86185.1}; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatus FGP-2.;"
SCNpilot_expt_500_p_scaffold_1967_curated_2
Candidatus Paracaedibacter acanthamoebae, Candidatus Paracaedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3476..5056)
DNA (1581bp) protein (527aa)
hypothetical protein n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI0002E4E216
hypothetical protein n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI0002E4E216
Uncharacterized protein {ECO:0000313|EMBL:AIK96255.1}; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIK96255.1}; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_1967_curated_3
Pseudomonas entomophila, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5649..5876)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI000348E99D
hypothetical protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI000348E99D
hypothetical protein; K05375 MbtH protein
hypothetical protein; K05375 MbtH protein
SCNpilot_expt_500_p_scaffold_1967_curated_4
Fischerella sp. JSC-11, Fischerella, Stigonematales, Cyanobacteria, Bacteria

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comp(5924..6250)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI0003042DAA
hypothetical protein n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI0003042DAA
MbtH domain protein {ECO:0000313|EMBL:EHC19670.1}; TaxID=741277 species="Bacteria; Cyanobacteria; Stigonematales; Fischerella.;" source="Fischerella sp. JSC-11.;"
MbtH domain protein {ECO:0000313|EMBL:EHC19670.1}; TaxID=741277 species="Bacteria; Cyanobacteria; Stigonematales; Fischerella.;" source="Fischerella sp. JSC-11.;"
SCNpilot_expt_500_p_scaffold_1967_curated_5
CG_Verruco_01, Verrucomicrobia, Bacteria

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comp(6446..8245)
DNA (1800bp) protein (600aa)
Multidrug resistance protein Atm1 id=4064194 bin=GWA2_TM6_36_9 species=GWA2_TM6_36_9 genus=GWA2_TM6_36_9 taxon_order=GWA2_TM6_36_9 taxon_class=GWA2_TM6_36_9 phylum=TM6 tax=GWA2_TM6_36_9 organism_group=TM6
Multidrug resistance protein Atm1 id=4064194 bin=GWA2_TM6_36_9 species=GWA2_TM6_36_9 genus=GWA2_TM6_36_9 taxon_order=GWA2_TM6_36_9 taxon_class=GWA2_TM6_36_9 phylum=TM6 tax=GWA2_TM6_36_9 organism_group=TM6
multidrug resistance protein Atm1; K06147 ATP-binding cassette, subfamily B, bacterial
multidrug resistance protein Atm1; K06147 ATP-binding cassette, subfamily B, bacterial
SCNpilot_expt_500_p_scaffold_1967_curated_6

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8587..9483
DNA (897bp) protein (299aa)
racX; aspartate racemase (EC:5.1.1.13); K01779 aspartate racemase [EC:5.1.1.13]
racX; aspartate racemase (EC:5.1.1.13); K01779 aspartate racemase [EC:5.1.1.13]
racX; aspartate racemase (EC:5.1.1.13); K01779 aspartate racemase [EC:5.1.1.13]
Aspartate racemase n=1 Tax=Bacillus pumilus (strain SAFR-032) RepID=A8FC53_BACP2
SCNpilot_expt_500_p_scaffold_1967_curated_7
Xenorhabdus bovienii, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9485..11056
DNA (1572bp) protein (524aa)
Asparagine synthetase {ECO:0000313|EMBL:CDH20375.1}; EC=6.3.5.4 {ECO:0000313|EMBL:CDH20375.1};; TaxID=1398203 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus bovienii str. kraussei Quebec.;"
Asparagine synthetase {ECO:0000313|EMBL:CDH20375.1}; EC=6.3.5.4 {ECO:0000313|EMBL:CDH20375.1};; TaxID=1398203 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus bovienii str. kraussei Quebec.;"
asnB2; asparagine synthetase B2; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
asnB2; asparagine synthetase B2; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
SCNpilot_expt_500_p_scaffold_1967_curated_8
Rickettsia australis, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11402..12073)
DNA (672bp) protein (224aa)
membrane protein n=1 Tax=Rickettsia helvetica RepID=UPI000288524E
membrane protein n=1 Tax=Rickettsia helvetica RepID=UPI000288524E
hypothetical protein; K09125 hypothetical protein
hypothetical protein; K09125 hypothetical protein
SCNpilot_expt_500_p_scaffold_1967_curated_9
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(12302..13009)
DNA (708bp) protein (236aa)
Phosphopantetheinyl transferase n=1 Tax=Moorea producens 3L RepID=F4XYJ4_9CYAN
Phosphopantetheinyl transferase n=1 Tax=Moorea producens 3L RepID=F4XYJ4_9CYAN
Phosphopantetheinyl transferase {ECO:0000313|EMBL:EGJ30407.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
Phosphopantetheinyl transferase {ECO:0000313|EMBL:EGJ30407.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
Displaying 9 items

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