ggKbase home page

SCNpilot_expt_500_p_scaffold_1707_curated

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1707_curated_1
unknown

Not on your lists

269..1156
DNA (888bp) protein (296aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1707_curated_2
Candidatus Magnetobacterium bavaricum, Candidatus Magnetobacterium, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

1592..3364
DNA (1773bp) protein (591aa)
Membrane protein {ECO:0000313|EMBL:KJU86754.1}; TaxID=29290 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magnetobacterium bavaricum.;"
Membrane protein {ECO:0000313|EMBL:KJU86754.1}; TaxID=29290 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magnetobacterium bavaricum.;"
SCNpilot_expt_500_p_scaffold_1707_curated_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3380..4201
DNA (822bp) protein (274aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KLP6_9FIRM
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KLP6_9FIRM
Glycosyltransferases involved in cell wall biogenesis
Glycosyltransferases involved in cell wall biogenesis
SCNpilot_expt_500_p_scaffold_1707_curated_4
Pseudoalteromonas piscicida, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4286..5281
DNA (996bp) protein (332aa)
ocd; ornithine cyclodeaminase (EC:4.3.1.12); K01750 ornithine cyclodeaminase [EC:4.3.1.12]
ocd; ornithine cyclodeaminase (EC:4.3.1.12); K01750 ornithine cyclodeaminase [EC:4.3.1.12]
ocd; ornithine cyclodeaminase (EC:4.3.1.12); K01750 ornithine cyclodeaminase [EC:4.3.1.12]
Putative Ornithine cyclodeaminase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G1U5_SORC5
SCNpilot_expt_500_p_scaffold_1707_curated_5
Cylindrospermum stagnale, Cylindrospermum, Nostocales, Cyanobacteria, Bacteria

Not on your lists

5451..7073
DNA (1623bp) protein (541aa)
Putative Zn-dependent hydrolase of beta-lactamase fold protein n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9X6X9_9NOST
Putative Zn-dependent hydrolase of beta-lactamase fold protein n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9X6X9_9NOST
putative Zn-dependent hydrolase of beta-lactamase fold protein
putative Zn-dependent hydrolase of beta-lactamase fold protein
SCNpilot_expt_500_p_scaffold_1707_curated_6
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7132..7509
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00037C7D1A
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00037C7D1A
cation/cationic drug transporter
cation/cationic drug transporter
SCNpilot_expt_500_p_scaffold_1707_curated_7
CG_Verruco_01, Verrucomicrobia, Bacteria

Not on your lists

7566..8771
DNA (1206bp) protein (402aa)
Sodium:dicarboxylate symporter family protein n=2 Tax=Lawsonia intracellularis RepID=M1GIW5_LAWIN
Sodium:dicarboxylate symporter family protein n=2 Tax=Lawsonia intracellularis RepID=M1GIW5_LAWIN
hypothetical protein
hypothetical protein
SCNpilot_expt_500_p_scaffold_1707_curated_8
unknown

Not on your lists

comp(8776..9999)
DNA (1224bp) protein (408aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1707_curated_9
Calothrix parietina, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(9989..10786)
DNA (798bp) protein (266aa)
oleoyl-(acyl-carrier-protein) hydrolase (EC:3.1.2.14)
oleoyl-(acyl-carrier-protein) hydrolase (EC:3.1.2.14)
oleoyl-(acyl-carrier-protein) hydrolase (EC:3.1.2.14)
Oleoyl-(Acyl-carrier-protein) hydrolase {ECO:0000313|EMBL:AFZ01586.1}; EC=3.1.2.14 {ECO:0000313|EMBL:AFZ01586.1};; TaxID=1170562 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 6303.;"
SCNpilot_expt_500_p_scaffold_1707_curated_10
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10886..11632)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EBA6_9BACT
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EBA6_9BACT
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:AIL47097.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:AIL47097.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
SCNpilot_expt_500_p_scaffold_1707_curated_11
unknown

Not on your lists

comp(11664..11774)
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1707_curated_12
Candidatus Paracaedibacter acanthamoebae, Candidatus Paracaedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11762..13351)
DNA (1590bp) protein (530aa)
N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QGR0_9CYAN
N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QGR0_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:AIK96255.1}; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibacter acanthamoebae.;"
Uncharacterized protein {ECO:0000313|EMBL:AIK96255.1}; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibacter acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_1707_curated_13
Cyanothece sp. CCY0110, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(13389..15095)
DNA (1707bp) protein (569aa)
Peptide synthetase n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IP47_9CHRO
Peptide synthetase n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IP47_9CHRO
Peptide synthetase {ECO:0000313|EMBL:EAZ91849.1}; TaxID=391612 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. CCY0110.;"
Peptide synthetase {ECO:0000313|EMBL:EAZ91849.1}; TaxID=391612 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. CCY0110.;"
Displaying 13 items

View Taxonomy