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SCNpilot_expt_500_p_scaffold_2301_curated_3

Organism: scnpilot_dereplicated_Caedibacter_1

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(1141..1437)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Pseudomonas sp. CBZ-4 RepID=UPI00034CC5B7 similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 97.0
  • Bit_score: 74
  • Evalue 6.80e-11
LysR family transcriptional regulator n=1 Tax=Pseudomonas sp. CBZ-4 RepID=UPI00034CC5B7 similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 97.0
  • Bit_score: 74
  • Evalue 6.80e-11
Uncharacterized protein {ECO:0000313|EMBL:AIL12601.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 98.0
  • Bit_score: 177
  • Evalue 1.10e-41

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 297
TTGTTAGACCTTAAACAATTATCTGCATTCTATTATGTTGCGAAAACAAGAAACTTCACTTTGGCTGAGACAATAGTCGGCGTTAAACAATCGTGGTTGAGTCGTCAAATTTCTGAATCAAAAAACCAATTCGGAAGTCTTTTACTGGAAAGAGGCCATGACACTGTTTCTTTAACCCCAGAAGGACAACTGGTCTATGAAGTAGTTGGAAAGCTCTTATTTGAGGCTAAAATCATTGAAAGCCTCATGTCTGAAAAGCATAATGAACCAAAAGGTAAGCTTAATAGTTCGACCTGA
PROTEIN sequence
Length: 99
LLDLKQLSAFYYVAKTRNFTLAETIVGVKQSWLSRQISESKNQFGSLLLERGHDTVSLTPEGQLVYEVVGKLLFEAKIIESLMSEKHNEPKGKLNSST*