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SCNpilot_cont_500_bf_scaffold_43_curated

Search features with annotation key words

Displaying items 151-180 of 328 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_43_curated_148
unknown

Not on your lists

111594..111989
DNA (396bp) protein (132aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_43_curated_149
unknown

Not on your lists

111989..112711
DNA (723bp) protein (241aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_43_curated_150
unknown

Not on your lists

112714..113373
DNA (660bp) protein (220aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_43_curated_151
unknown

Not on your lists

113511..113786
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_43_curated_152
unknown

Not on your lists

comp(113783..114541)
DNA (759bp) protein (253aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_43_curated_153
unknown

Not on your lists

comp(114538..114768)
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_43_curated_154
unknown

Not on your lists

comp(114768..115367)
DNA (600bp) protein (200aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_43_curated_155
unknown

Not on your lists

115747..115977
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_43_curated_156
Mycobacterium parascrofulaceum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(115974..116801)
DNA (828bp) protein (276aa)
Site-specific recombinase, phage integrase family n=1 Tax=Mycobacterium parascrofulaceum ATCC BAA-614 PF43_9MYCO">RepID=D5PF43_9MYCO
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFG75323.1}; TaxID=525368 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium parascrofulaceum ATCC BAA-614.;"
tyrosine recombinase
SCNpilot_cont_500_bf_scaffold_43_curated_157
unknown

Not on your lists

comp(116842..117192)
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_43_curated_158
unknown

Not on your lists

comp(117189..117452)
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_43_curated_159
unknown

Not on your lists

comp(117440..117685)
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_43_curated_160
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(117903..118379)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VVC3_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ39655.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCNpilot_cont_500_bf_scaffold_43_curated_161
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

118479..118961
DNA (483bp) protein (161aa)
AsnC family transcriptional regulator n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B618A1
AsnC family transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:AGL14858.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
SCNpilot_cont_500_bf_scaffold_43_curated_162
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

118993..119679
DNA (687bp) protein (229aa)
Uncharacterized protein n=2 Tax=Saccharopolyspora erythraea RepID=A4FEY6_SACEN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQD81303.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
SCNpilot_cont_500_bf_scaffold_43_curated_163
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

120018..120929
DNA (912bp) protein (304aa)
methionine ABC transporter substrate-binding protein n=1 Tax=Promicromonospora sukumoe RepID=UPI00036813A2
Methionine ABC transporter substrate-binding protein {ECO:0000313|EMBL:EYR62002.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
NLPA lipoprotein; K02073 D-methionine transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_43_curated_164
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

121013..122056
DNA (1044bp) protein (348aa)
phosphonate-transporting ATPase (EC:3.6.3.28); K02071 D-methionine transport system ATP-binding protein
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=743718 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericola variabilis (strain 225).;"
Phosphonate-transporting ATPase n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FUK7_ISOV2
SCNpilot_cont_500_bf_scaffold_43_curated_165
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

122056..122712
DNA (657bp) protein (219aa)
methionine ABC transporter ATP-binding protein n=1 Tax=Sciscionella marina RepID=UPI0003785026
Methionine ABC transporter ATP-binding protein {ECO:0000313|EMBL:EYR62004.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
ABC-type metal ion transport system, permease component; K02072 D-methionine transport system permease protein
SCNpilot_cont_500_bf_scaffold_43_curated_166
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(122800..123360)
DNA (561bp) protein (187aa)
isochorismatase n=1 Tax=Nonomuraea coxensis RepID=UPI00035C2C98
isochorismatase hydrolase
Isochorismatase hydrolase {ECO:0000313|EMBL:ADP78651.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_cont_500_bf_scaffold_43_curated_167
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(123430..125541)
DNA (2112bp) protein (704aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-]
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
DNA primase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H2T2_CELFA
SCNpilot_cont_500_bf_scaffold_43_curated_168
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(125610..126902)
DNA (1293bp) protein (431aa)
deoxyguanosinetriphosphate triphosphohydrolase; K01129 dGTPase [EC:3.1.5.1]
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H2T5_CELFA
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_500_bf_scaffold_43_curated_169
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(126912..127685)
DNA (774bp) protein (258aa)
hypothetical protein id=7721810 bin=CNBR_ACT species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
hypothetical protein
Tax=BJP_IG2157_Actinomycetales_63_19
SCNpilot_cont_500_bf_scaffold_43_curated_170
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(127779..129653)
DNA (1875bp) protein (625aa)
alpha amylase catalytic subunit; K01187 alpha-glucosidase [EC:3.2.1.20]
Alpha amylase catalytic region n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T9X0_MICAI
Alpha-amlyase {ECO:0000313|EMBL:KGM11812.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
SCNpilot_cont_500_bf_scaffold_43_curated_171
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(129727..131274)
DNA (1548bp) protein (516aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Alpha amylase catalytic region n=1 Tax=Clostridium sp. CAG:352 RepID=R6RD93_9CLOT
amyY; alpha-amylase
SCNpilot_cont_500_bf_scaffold_43_curated_172
Bifidobacterium tsurumiense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(131271..131993)
DNA (723bp) protein (241aa)
ABC transporter permease n=1 Tax=Bifidobacterium minimum RepID=UPI0003B5227F
Putative ABC transport system membrane protein {ECO:0000313|EMBL:KFJ04924.1}; TaxID=356829 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium tsurumiense.;"
putative ABC transport system membrane protein
SCNpilot_cont_500_bf_scaffold_43_curated_173
Bifidobacterium minimum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(131990..132925)
DNA (936bp) protein (312aa)
sugar ABC transporter permease n=1 Tax=Bifidobacterium minimum RepID=UPI0003B5E1F8
ABC transporter permease {ECO:0000313|EMBL:KFI74245.1}; TaxID=1693 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium minimum.;"
ABC transporter permease
SCNpilot_cont_500_bf_scaffold_43_curated_174
Bifidobacterium stellenboschense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(132922..134352)
DNA (1431bp) protein (477aa)
ABC transporter permease protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GQZ0_9BIFI
Maltodextrin transport system permease protein malC {ECO:0000313|EMBL:KFI92971.1}; TaxID=762211 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stellenboschense.;"
cyclodextrin ABC transporter membrane protein; K10109 maltose/maltodextrin transport system permease protein
SCNpilot_cont_500_bf_scaffold_43_curated_175
Bifidobacterium minimum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(134446..135708)
DNA (1263bp) protein (421aa)
ABC transporter substrate-binding protein n=1 Tax=Bifidobacterium minimum RepID=UPI0003B6ABEC
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFI74247.1}; TaxID=1693 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium minimum.;"
ABC transporter substrate-binding protein
SCNpilot_cont_500_bf_scaffold_43_curated_176
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

136185..137228
DNA (1044bp) protein (348aa)
Transcriptional regulator, LacI family n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UG44_CELFN
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ADG75067.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_500_bf_scaffold_43_curated_177
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

137248..138972
DNA (1725bp) protein (575aa)
alpha amylase; K01187 alpha-glucosidase [EC:3.2.1.20]
Alpha amylase catalytic region n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UG45_CELFN
Alpha amylase catalytic region {ECO:0000313|EMBL:ADG75068.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
Displaying items 151-180 of 328 in total

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