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SCNpilot_cont_500_bf_scaffold_43_curated

Search features with annotation key words

Displaying items 181-210 of 328 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_43_curated_178
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(139173..140645)
DNA (1473bp) protein (491aa)
HNH nuclease n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FQS4_ISOV2
Uncharacterized protein {ECO:0000313|EMBL:KGM15571.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
HNH nuclease
SCNpilot_cont_500_bf_scaffold_43_curated_179
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(140978..142162)
DNA (1185bp) protein (395aa)
TIM-barrel protein, nifR3 family n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2C3_CELGA
tRNA-dihydrouridine synthase {ECO:0000313|EMBL:KGM01738.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
TIM-barrel protein, nifR3 family
SCNpilot_cont_500_bf_scaffold_43_curated_180
Propionibacterium sp. KPL1844, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(142311..143819)
DNA (1509bp) protein (503aa)
membrane protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B46267
Uncharacterized protein {ECO:0000313|EMBL:ERS35737.1}; TaxID=1203573 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KPL1844.;"
membrane protein
SCNpilot_cont_500_bf_scaffold_43_curated_181
Arthrobacter sp. 11W110_air, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(143871..145451)
DNA (1581bp) protein (527aa)
peptidase M20; K13049 carboxypeptidase PM20D1 [EC:3.4.17.-]
Peptidase M20 n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RL74_BLASD
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:CEA08514.1}; Flags: Precursor;; TaxID=1461584 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. 11W110_air.;"
SCNpilot_cont_500_bf_scaffold_43_curated_182
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(145448..147049)
DNA (1602bp) protein (534aa)
Putative membrane transport protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RL75_BLASD
putative membrane transport protein
Putative membrane transport protein {ECO:0000313|EMBL:CCG01205.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
SCNpilot_cont_500_bf_scaffold_43_curated_183
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

147157..147717
DNA (561bp) protein (187aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2C2_CELGA
RNA polymerase, sigma-24 subunit, ECF subfamily
Uncharacterized protein {ECO:0000313|EMBL:KGM01737.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
SCNpilot_cont_500_bf_scaffold_43_curated_184
unknown

Not on your lists

147714..149420
DNA (1707bp) protein (569aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_43_curated_185
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

149469..149789
DNA (321bp) protein (107aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2C2_CELGA
RNA polymerase, sigma-24 subunit, ECF subfamily
Uncharacterized protein {ECO:0000313|EMBL:KGM01737.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
SCNpilot_cont_500_bf_scaffold_43_curated_186
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(149916..150182)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WHP1_9ACTO
cytotoxic translational repressor of toxin-antitoxin stability system
Uncharacterized protein {ECO:0000313|EMBL:GAB91682.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
SCNpilot_cont_500_bf_scaffold_43_curated_187
Mycobacterium gilvum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(150179..150508)
DNA (330bp) protein (110aa)
Prevent-host-death family protein n=1 Tax=Mycobacterium sp. (strain Spyr1) RepID=E6TL19_MYCSR
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:ADT98177.1}; TaxID=278137 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain Spyr1).;"
SCNpilot_cont_500_bf_scaffold_43_curated_188
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(150616..152001)
DNA (1386bp) protein (462aa)
glycyl-tRNA synthetase; K01880 glycyl-tRNA synthetase [EC:6.1.1.14]
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
glycine-tRNA synthetase subunit beta n=1 Tax=Cellulomonas sp. JC225 RepID=UPI00031B1351
SCNpilot_cont_500_bf_scaffold_43_curated_189
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

152176..152739
DNA (564bp) protein (188aa)
Membrane-associated protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UG54_CELFN
membrane-associated protein
Membrane-associated protein {ECO:0000313|EMBL:ADG75077.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_500_bf_scaffold_43_curated_190
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(152861..153724)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Rhodococcus opacus M213 RepID=K8XKG9_RHOOP
Uncharacterized protein {ECO:0000313|EMBL:EKT81336.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_43_curated_191
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

154079..155029
DNA (951bp) protein (317aa)
PDZ/DHR/GLGF domain protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H7I8_CELFA
PDZ/DHR/GLGF domain-containing protein
PDZ/DHR/GLGF domain protein {ECO:0000313|EMBL:AEE44545.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_500_bf_scaffold_43_curated_192
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(155026..155856)
DNA (831bp) protein (277aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31]
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
Isoprenyl transferase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UG56_CELFN
SCNpilot_cont_500_bf_scaffold_43_curated_193
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

156038..157504
DNA (1467bp) protein (489aa)
response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (EC:3.1.4.-)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003735C9C
Uncharacterized protein {ECO:0000313|EMBL:KGM09547.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
SCNpilot_cont_500_bf_scaffold_43_curated_194
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(157501..158232)
DNA (732bp) protein (244aa)
DNA repair protein RecO n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H2V9_CELFA
DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O)
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_500_bf_scaffold_43_curated_195
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(158384..160180)
DNA (1797bp) protein (599aa)
2-isopropylmalate synthase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13]
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
2-isopropylmalate synthase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UG58_CELFN
SCNpilot_cont_500_bf_scaffold_43_curated_196
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(160249..162807)
DNA (2559bp) protein (853aa)
Transglutaminase domain protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UG63_CELFN
transglutaminase domain protein
Transglutaminase domain protein {ECO:0000313|EMBL:ADG75086.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_500_bf_scaffold_43_curated_197
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(162804..163949)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2A8_CELGA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI11765.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_500_bf_scaffold_43_curated_198
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(163951..164907)
DNA (957bp) protein (319aa)
ATPase AAA; K03924 MoxR-like ATPase [EC:3.6.3.-]
ATPase associated with various cellular activities AAA_3 n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2A7_CELGA
ATPase associated with various cellular activities AAA_3 {ECO:0000313|EMBL:AEI11764.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_500_bf_scaffold_43_curated_199
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(164939..170977)
DNA (6039bp) protein (2013aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0003130AA4
Fibronectin {ECO:0000313|EMBL:KGM00724.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
Fibronectin type III domain-containing protein
SCNpilot_cont_500_bf_scaffold_43_curated_200
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(170974..172638)
DNA (1665bp) protein (555aa)
Serine/threonine protein kinase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UG67_CELFN
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ADG75090.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_500_bf_scaffold_43_curated_201
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(172649..173557)
DNA (909bp) protein (303aa)
Forkhead-associated protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2A4_CELGA
Forkhead-associated protein
Forkhead-associated protein {ECO:0000313|EMBL:AEI11761.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_500_bf_scaffold_43_curated_202
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(173554..174318)
DNA (765bp) protein (255aa)
Protein serine/threonine phosphatase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H2X0_CELFA
protein serine/threonine phosphatase
Protein serine/threonine phosphatase {ECO:0000313|EMBL:AEE46469.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_500_bf_scaffold_43_curated_203

Not on your lists

174565..175659
DNA (1095bp) protein (365aa)
LacI family transcriptional regulator n=1 Tax=Humibacter albus RepID=UPI0003B7138E
Periplasmic binding protein-like domain {ECO:0000313|EMBL:AGU11901.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
LacI family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_43_curated_204

Not on your lists

175682..176971
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Humibacter albus RepID=UPI0003B4E336
Bacterial extracellular solute-binding protein {ECO:0000313|EMBL:AGU11891.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_43_curated_205

Not on your lists

176968..177921
DNA (954bp) protein (318aa)
ABC transporter permease n=1 Tax=Curtobacterium sp. B18 RepID=UPI0003459994
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:AGU11892.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
sugar ABC transporter permease; K02025 multiple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_43_curated_206

Not on your lists

177911..178774
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003736F17
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:AGU11893.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
sugar ABC transporter permease; K02026 multiple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_43_curated_207

Not on your lists

178771..180129
DNA (1359bp) protein (453aa)
Glycosyl hydrolase family 1 n=1 Tax=uncultured organism RepID=T1WBJ0_9ZZZZ
Glycosyl hydrolase family 1 {ECO:0000313|EMBL:AGU11894.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
Displaying items 181-210 of 328 in total

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