ggKbase home page

SCNpilot_cont_500_bf_scaffold_1342_curated

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1342_curated_1
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

633..1301
DNA (669bp) protein (223aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A5B9_CELGA
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADG73593.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_500_bf_scaffold_1342_curated_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1759..2469)
DNA (711bp) protein (237aa)
membrane protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B6B7B7
Cation efflux family protein {ECO:0000313|EMBL:KJL39031.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
putative Co/Zn/Cd cation transporter
SCNpilot_cont_500_bf_scaffold_1342_curated_3
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2415..2720)
DNA (306bp) protein (102aa)
ArsR family transcriptional regulator n=1 Tax=Nesterenkonia alba RepID=UPI0003B67841
ArsR family transcriptional regulator {ECO:0000313|EMBL:KFI77263.1}; TaxID=31954 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. pseudolongum.;"
ctpR; ArsR DNA-binding transcription regulator
SCNpilot_cont_500_bf_scaffold_1342_curated_4
Corynebacterium humireducens, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2843..4117)
DNA (1275bp) protein (425aa)
MFS transporter n=1 Tax=Nocardiopsis potens RepID=UPI000349F8C6
Major facilitator transporter {ECO:0000313|EMBL:AJE32814.1}; TaxID=1223515 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium humireducens NBRC 106098 = DSM 45392.;"
major facilitator transporter
SCNpilot_cont_500_bf_scaffold_1342_curated_5
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4162..5340)
DNA (1179bp) protein (393aa)
iscS3; Cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase {ECO:0000313|EMBL:CCK28676.1}; EC=2.8.1.7 {ECO:0000313|EMBL:CCK28676.1};; TaxID=1214101 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
Cysteine desulfurase n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4QX75_9ACTO
SCNpilot_cont_500_bf_scaffold_1342_curated_6
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5340..5678)
DNA (339bp) protein (113aa)
DsrE family protein n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SBZ7_INTC7
DsrE family protein; K06039 uncharacterized protein involved in oxidation of intracellular sulfur
DsrE family protein {ECO:0000313|EMBL:ADU49537.1}; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
SCNpilot_cont_500_bf_scaffold_1342_curated_7
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5717..6382
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Nocardiopsis kunsanensis RepID=UPI00034CEDD6
ArsR family transcriptional regulator {ECO:0000313|EMBL:EWT07134.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
ArsR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1342_curated_8
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6551..7342)
DNA (792bp) protein (264aa)
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-]
Prolipoprotein diacylglyceryl transferase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2V4_CELGA
Prolipoprotein diacylglyceryl transferase {ECO:0000313|EMBL:AEI10671.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_500_bf_scaffold_1342_curated_9
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7356..7988)
DNA (633bp) protein (211aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2V2_CELGA
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:AEI10669.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_500_bf_scaffold_1342_curated_10
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7985..8965)
DNA (981bp) protein (327aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2V1_CELGA
cytochrome c biogenesis protein transmembrane region
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:AEI10668.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_500_bf_scaffold_1342_curated_11
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8955..9257)
DNA (303bp) protein (101aa)
Glutaredoxin 2 n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2V0_CELGA
glutaredoxin 2
Glutaredoxin 2 {ECO:0000313|EMBL:AEI10667.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_500_bf_scaffold_1342_curated_12
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9425..10147
DNA (723bp) protein (241aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2U9_CELGA
two component transcriptional regulator, winged helix family
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEI10666.1}; Flags: Precursor;; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_500_bf_scaffold_1342_curated_13
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10144..11244
DNA (1101bp) protein (367aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2U8_CELGA
integral membrane sensor signal transduction histidine kinase
SCNpilot_cont_500_bf_scaffold_1342_curated_14
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11402..11638
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2U4_CELGA
Uncharacterized protein {ECO:0000313|EMBL:EYR62782.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
hypothetical protein; K08982 putative membrane protein
SCNpilot_cont_500_bf_scaffold_1342_curated_15
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11638..11991
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2U3_CELGA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI10660.1}; Flags: Precursor;; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_500_bf_scaffold_1342_curated_16
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12202..12474
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. EsD8 RepID=N1M503_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:EWT07746.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1342_curated_17
[Brevibacterium] flavum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12471..12758
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Corynebacterium glutamicum ATCC 14067 RepID=G6WXC8_CORGT
Uncharacterized protein {ECO:0000313|EMBL:AKF28715.1}; TaxID=92706 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="[Brevibacterium] flavum.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1342_curated_18
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12845..13075
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKU0_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL82425.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
SCNpilot_cont_500_bf_scaffold_1342_curated_19
unknown

Not on your lists

13213..13626
DNA (414bp) protein (138aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1342_curated_20
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13755..16541
DNA (2787bp) protein (929aa)
copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Copper-translocating P-type ATPase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2U2_CELGA
Copper-translocating P-type ATPase {ECO:0000313|EMBL:AEI10659.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_500_bf_scaffold_1342_curated_21
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16568..16846
DNA (279bp) protein (93aa)
Regulated in copper repressor n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1LNV4_9MICO
hypothetical protein
Regulated in copper repressor {ECO:0000313|EMBL:ERG63662.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
SCNpilot_cont_500_bf_scaffold_1342_curated_22
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17021..18355
DNA (1335bp) protein (445aa)
Putative Prolipoprotein diacylglyceryl transferase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RQ36_BLASD
Diacylglyceryl transferase {ECO:0000313|EMBL:EYR64507.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
lgt2; putative Prolipoprotein diacylglyceryl transferase
SCNpilot_cont_500_bf_scaffold_1342_curated_23
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18415..18591
DNA (177bp) protein (59aa)
copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Copper-translocating P-type ATPase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2U2_CELGA
Copper-translocating P-type ATPase {ECO:0000313|EMBL:AEI10659.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_500_bf_scaffold_1342_curated_24
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19043..19213
DNA (171bp) protein (57aa)
Heavy metal translocating P-type ATPase n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SB46_INTC7
ATPase P {ECO:0000313|EMBL:EYR63755.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
ATPase P
SCNpilot_cont_500_bf_scaffold_1342_curated_25
unknown

Not on your lists

comp(19421..19645)
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1342_curated_26
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19787..20437)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BSY9_XYLCX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ30831.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
SCNpilot_cont_500_bf_scaffold_1342_curated_27
unknown

Not on your lists

20898..21122
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1342_curated_28
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21502..22308
DNA (807bp) protein (269aa)
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2T7_CELGA
peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin {ECO:0000313|EMBL:AEI10654.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_500_bf_scaffold_1342_curated_29
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23133..23357
DNA (225bp) protein (75aa)
Copper chaperone n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BFJ7_SANKS
copper chaperone
Copper chaperone {ECO:0000313|EMBL:ACZ23500.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
SCNpilot_cont_500_bf_scaffold_1342_curated_30
unknown

Not on your lists

23354..23521
DNA (168bp) protein (56aa)

This feature has no annotations

Displaying items 1-30 of 61 in total

View Taxonomy