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SCNpilot_expt_500_p_scaffold_648_curated

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_648_curated_1
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

159..668
DNA (510bp) protein (170aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81365.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_648_curated_2
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

911..1582
DNA (672bp) protein (224aa)
Acetyltransferase (GNAT) family protein {ECO:0000313|EMBL:CDZ81366.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_648_curated_3
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(1600..2256)
DNA (657bp) protein (219aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81367.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_648_curated_4
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(2350..2874)
DNA (525bp) protein (175aa)
pfpI; intraceLLular protease 1; K05520 protease I [EC:3.2.-.-]
IntraceLLular protease 1 n=2 Tax=Parachlamydia acanthamoebae RepID=F8KYR2_PARAV
Putative cysteine protease YraA {ECO:0000313|EMBL:CDZ81368.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_648_curated_5
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

3083..4765
DNA (1683bp) protein (561aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'
kdpA; potassium-transporting ATPase A chain; K01546 K+-transporting ATPase ATPase A chain [EC:3.6.3.12]
Potassium-transporting ATPase A chain n=2 Tax=Parachlamydia acanthamoebae RepID=F8L2P0_PARAV
SCNpilot_expt_500_p_scaffold_648_curated_6
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

4767..5711
DNA (945bp) protein (315aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'
Potassium-transporting ATPase B chain n=1 Tax=Bdellovibrio exovorus JSS RepID=M4VA24_9DELT
hypothetical protein
SCNpilot_expt_500_p_scaffold_648_curated_7
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

5751..6860
DNA (1110bp) protein (370aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'
kdpB; potassium-transporting ATPase subunit B; K01547 K+-transporting ATPase ATPase B chain [EC:3.6.3.12]
Potassium-transporting ATPase B chain n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8L2N9_PARAV
SCNpilot_expt_500_p_scaffold_648_curated_8
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

6864..7439
DNA (576bp) protein (192aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'
kdpC; potassium-transporting ATPase subunit C; K01548 K+-transporting ATPase ATPase C chain [EC:3.6.3.12]
Potassium-transporting ATPase C chain n=2 Tax=Parachlamydia acanthamoebae RepID=F8KXP4_PARAV
SCNpilot_expt_500_p_scaffold_648_curated_9
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

7432..10056
DNA (2625bp) protein (875aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
kdpD; sensor protein kdpD; K07646 two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
Sensor protein kdpD n=2 Tax=Parachlamydia acanthamoebae RepID=F8L2N8_PARAV
SCNpilot_expt_500_p_scaffold_648_curated_10
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(10290..11447)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=2 Tax=Waddlia chondrophila RepID=D6YVI6_WADCW
Carbamoyl phosphate synthase-like protein {ECO:0000313|EMBL:CDZ81375.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_648_curated_11
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

11684..12913
DNA (1230bp) protein (410aa)
Amine oxidase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EPN4_RUNSL
Dehydrosqualene desaturase {ECO:0000313|EMBL:CDZ81376.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
amine oxidase
SCNpilot_expt_500_p_scaffold_648_curated_12
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(12919..14721)
DNA (1803bp) protein (601aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81377.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_648_curated_13
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

14837..16558
DNA (1722bp) protein (574aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81378.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_648_curated_14
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

16586..18106
DNA (1521bp) protein (507aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81379.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_648_curated_15
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(18107..18724)
DNA (618bp) protein (206aa)
Acetyltransferase n=1 Tax=Streptomyces tsukubaensis NRRL18488 RepID=I2N0U3_9ACTO
Putative acetyltransferase {ECO:0000313|EMBL:CDZ81380.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
puromycin N-acetyltransferase, putative
SCNpilot_expt_500_p_scaffold_648_curated_16
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

19041..19583
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KYV2_PARAV
Uncharacterized protein {ECO:0000313|EMBL:CDZ81381.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_648_curated_17
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

19845..20345
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MCM9_PARUW
Uncharacterized protein {ECO:0000313|EMBL:CDZ81382.1}; Flags: Precursor;; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_648_curated_18
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

20412..21395
DNA (984bp) protein (328aa)
putative oxidoreductase; K00459 nitronate monooxygenase [EC:1.13.12.16]
Nitronate monooxygenase {ECO:0000313|EMBL:CDZ81383.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
2-nitropropane dioxygenase id=3531975 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
SCNpilot_expt_500_p_scaffold_648_curated_19
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

21392..21901
DNA (510bp) protein (170aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
Peptide methionine sulfoxide reductase MsrA id=4857751 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
SCNpilot_expt_500_p_scaffold_648_curated_20
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

22160..22531
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Xylella fastidiosa subsp. sandyi Ann-1 RepID=Q3R3H1_XYLFS
Uncharacterized protein {ECO:0000313|EMBL:KIC76416.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_648_curated_21
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

22528..22932
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI0002D661F6
Uncharacterized protein {ECO:0000313|EMBL:KIC73281.1}; TaxID=362787 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Candidatus Protochlamydia amoebophila.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_648_curated_22
unknown

Not on your lists

comp(22872..23000)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_648_curated_23
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(23410..23568)
DNA (159bp) protein (53aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81385.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_648_curated_24
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(23621..25072)
DNA (1452bp) protein (484aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81386.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_648_curated_25
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(25144..26145)
DNA (1002bp) protein (334aa)
hypothetical protein; K01569 oxalate decarboxylase [EC:4.1.1.2]
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KYV7_PARAV
Oxalate decarboxylase OxdC {ECO:0000313|EMBL:CDZ81387.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_648_curated_26
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(26208..26639)
DNA (432bp) protein (144aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81388.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_648_curated_27
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(26643..28193)
DNA (1551bp) protein (517aa)
Putative multidrug resistance membrane translocase protein, emrB n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MEZ8_PARUW
Multidrug resistance protein B {ECO:0000313|EMBL:CDZ81389.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
emrB; multidrug resistance membrane translocase, emrB; K03446 MFS transporter, DHA2 family, multidrug resistance protein B rbh
SCNpilot_expt_500_p_scaffold_648_curated_28
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(28153..29394)
DNA (1242bp) protein (414aa)
Probable multidrug resistance protein, emrA n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MEZ7_PARUW
Multidrug resistance protein MdtN {ECO:0000313|EMBL:CDZ81390.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
emrA; multidrug resistance protein, emrA; K03543 multidrug resistance protein A rbh
SCNpilot_expt_500_p_scaffold_648_curated_29
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

29533..30930
DNA (1398bp) protein (466aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
fumC; fumarate hydratase class II; K01679 fumarate hydratase, class II [EC:4.2.1.2]
Fumarate hydratase class II n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KYW0_PARAV
SCNpilot_expt_500_p_scaffold_648_curated_30
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

31004..32038
DNA (1035bp) protein (345aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KWM0_PARAV
Protein phosphatase 2C {ECO:0000313|EMBL:CDZ81392.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
Displaying items 1-30 of 33 in total

View Taxonomy