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SCNpilot_expt_500_p_scaffold_1806_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1806_curated_1
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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1..480
DNA (480bp) protein (160aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
pdhC; dihydrolipoyLLysine-residue acetyltransferase component of pyruvate dehydrogenase complex; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]
DihydrolipoyLLysine-residue acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8L126_PARAV
SCNpilot_expt_500_p_scaffold_1806_curated_2
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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832..1410
DNA (579bp) protein (193aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80558.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_1806_curated_3
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(1718..2776)
DNA (1059bp) protein (353aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
UDP-3-O-acylglucosamine N-acyltransferase n=2 Tax=Parachlamydia acanthamoebae RepID=F8KYJ1_PARAV
SCNpilot_expt_500_p_scaffold_1806_curated_4
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(2793..3368)
DNA (576bp) protein (192aa)
Skp-like protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KYJ0_PARAV
Outer membrane protein {ECO:0000313|EMBL:CDZ80560.1}; Flags: Precursor;; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
skp-like protein; K06142 outer membrane protein
SCNpilot_expt_500_p_scaffold_1806_curated_5
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(3393..5960)
DNA (2568bp) protein (856aa)
Putative outer membrane protein Omp85 n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MAE9_PARUW
Outer membrane protein Omp85 {ECO:0000313|EMBL:CDZ80561.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein; K07277 outer membrane protein
SCNpilot_expt_500_p_scaffold_1806_curated_6
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(6078..6674)
DNA (597bp) protein (199aa)
Recombination protein RecR n=1 Tax=Waddlia chondrophila (strain ATCC VR-1470 / WSU 86-1044) RepID=D6YWN6_WADCW
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
recR; Recombination protein recR; K06187 recombination protein RecR
SCNpilot_expt_500_p_scaffold_1806_curated_7
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

6790..7785
DNA (996bp) protein (332aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC:2.3.1.180); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
3-oxoacyl-[acyl-carrier-protein] synthase 3 id=4887675 bin=GWC2_Chlamydiae_50_10 species=Simkania negevensis genus=Simkania taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWC2_Chlamydiae_50_10 organism_group=Chlamydiae organism_desc=Good +
SCNpilot_expt_500_p_scaffold_1806_curated_8
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

7787..8737
DNA (951bp) protein (317aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
fabD; malonyl CoA-ACP transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
Malonyl CoA-acyl carrier protein transacylase n=2 Tax=Parachlamydia acanthamoebae RepID=F8KYI7_PARAV
SCNpilot_expt_500_p_scaffold_1806_curated_9
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

8734..9480
DNA (747bp) protein (249aa)
fabG; 3-oxoacyl-ACP reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-oxoacyl-[acyl-carrier-protein] reductase protein FabG n=2 Tax=Waddlia chondrophila RepID=D6YWN3_WADCW
3-oxoacyl-[acyl-carrier-protein] reductase FabG {ECO:0000313|EMBL:CDZ80565.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_1806_curated_10
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

9510..9752
DNA (243bp) protein (81aa)
Acyl carrier protein n=2 Tax=Waddlia chondrophila RepID=D6YWN2_WADCW
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
acpP; acyl carrier protein; K02078 acyl carrier protein
SCNpilot_expt_500_p_scaffold_1806_curated_11
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

10299..10508
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Pantoea sp. YR343 RepID=J3HBN7_9ENTR
CsbD-like protein {ECO:0000313|EMBL:CDZ80567.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1806_curated_12
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

10621..10779
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X2T3_COMTE
Uncharacterized protein {ECO:0000313|EMBL:CDZ80568.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1806_curated_13
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

10859..11407
DNA (549bp) protein (183aa)
Protein yciF n=2 Tax=Parachlamydia acanthamoebae RepID=F8KUY1_PARAV
Uncharacterized protein {ECO:0000313|EMBL:CDZ80569.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
yciF-A; protein yciF
SCNpilot_expt_500_p_scaffold_1806_curated_14
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(11431..11979)
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=Rhodospirillum rubrum RepID=Q2RRZ9_RHORT
Inner membrane protein YhhQ {ECO:0000313|EMBL:CDZ80570.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein; K09125 hypothetical protein
SCNpilot_expt_500_p_scaffold_1806_curated_15
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists


comp(11972..13558)
DNA (1587bp) protein (529aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
glyQS; glycyl-tRNA synthetase; K01880 glycyl-tRNA synthetase [EC:6.1.1.14]
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R8A8_9CHLA
SCNpilot_expt_500_p_scaffold_1806_curated_16
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(13646..14470)
DNA (825bp) protein (275aa)
Ankyrin repeat protein {ECO:0000313|EMBL:CDZ80572.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_1806_curated_17
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(14621..14884)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8L230_PARAV
Oxalate decarboxylase OxdC {ECO:0000313|EMBL:CDZ80573.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
Displaying 17 items

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