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SCNpilot_expt_500_p_scaffold_211_curated

Search features with annotation key words

Displaying items 61-90 of 186 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_211_curated_61
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

71542..72228
DNA (687bp) protein (229aa)
UPI0003D60D23 related cluster n=1 Tax=unknown RepID=UPI0003D60D23
Uncharacterized protein {ECO:0000313|EMBL:CDZ79624.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_211_curated_62
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(72191..73414)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KYH7_PARAV
Sulfonamide resistance protein {ECO:0000313|EMBL:CDZ79625.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein
SCNpilot_expt_500_p_scaffold_211_curated_63
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(73489..74364)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L9C1_SIMNZ
Putative non-heme bromoperoxidase BpoC {ECO:0000313|EMBL:CDZ79626.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_211_curated_64
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(74370..74789)
DNA (420bp) protein (140aa)
Transcriptional regulator mntR n=2 Tax=Parachlamydia acanthamoebae RepID=F8KWZ1_PARAV
Manganese transport regulator {ECO:0000313|EMBL:CDZ79627.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
mntR; transcriptional regulator MntR; K11924 DtxR family transcriptional regulator, manganese transport regulator
SCNpilot_expt_500_p_scaffold_211_curated_65
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

75228..76199
DNA (972bp) protein (324aa)
nrdB; ribonucleoside-diphosphate reductase small chain; K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] rbh
Probable ribonucleoside-diphosphate reductase small chain n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MBH6_PARUW
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000313|EMBL:CDZ79628.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_211_curated_66
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

76213..78528
DNA (2316bp) protein (772aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
nrdA; ribonucleoside-diphosphate reductase large chain; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] rbh
Ribonucleoside-diphosphate reductase n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MBH7_PARUW
SCNpilot_expt_500_p_scaffold_211_curated_67
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(78603..79688)
DNA (1086bp) protein (362aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ79630.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_211_curated_68
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(79838..80050)
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ79631.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_211_curated_69
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(80519..82375)
DNA (1857bp) protein (619aa)
Uncharacterized protein n=1 Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82BG1_STRAW
Protease 1 {ECO:0000313|EMBL:CDZ79633.1}; Flags: Precursor;; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_211_curated_70
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(82397..83077)
DNA (681bp) protein (227aa)
Probable mgtC protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6M9M6_PARUW
Putative Mg(2+) transport ATPase {ECO:0000313|EMBL:CDZ79634.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
mgtC; mgtC protein; K07507 putative Mg2+ transporter-C (MgtC) family protein
SCNpilot_expt_500_p_scaffold_211_curated_71
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

83160..83477
DNA (318bp) protein (106aa)
Small multidrug resistance protein n=3 Tax=Arcobacter butzleri RepID=G2HMZ1_9PROT
Quaternary ammonium compound-resistance protein SugE {ECO:0000313|EMBL:CDZ79635.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
sugE; suppresses groEL, may be chaperone; K11741 quaternary ammonium compound-resistance protein SugE
SCNpilot_expt_500_p_scaffold_211_curated_72
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

83571..84197
DNA (627bp) protein (209aa)
Oxygen-insensitive NADPH nitroreductase {ECO:0000313|EMBL:CDZ79636.1}; Flags: Precursor;; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
Nitroreductase id=3449236 bin=GWA1_Alphaproteobacteria_45_9 species=Methylomonas methanica genus=Methylomonas taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA1_Alphaproteobacteria_45_9 organism_group=Alphaproteobacteria organism_desc=Good marker genes; small
nitroreductase family protein
SCNpilot_expt_500_p_scaffold_211_curated_73
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(84187..85398)
DNA (1212bp) protein (404aa)
Putative Na(+)/H(+) antiporter n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MF31_PARUW
K(+)/H(+) antiporter {ECO:0000313|EMBL:CDZ79637.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
napA; Na(+)/H(+) antiporter rbh
SCNpilot_expt_500_p_scaffold_211_curated_74
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(85388..88318)
DNA (2931bp) protein (977aa)
Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YXW8_BRAFL
Uncharacterized protein {ECO:0000313|EMBL:CDZ79638.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_211_curated_75
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

88625..91927
DNA (3303bp) protein (1101aa)
Putative glycosyl hydrolase n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A2N5_DEIPD
Glycosyl hydrolase family 81 {ECO:0000313|EMBL:CDZ79639.1}; Flags: Precursor;; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
glycosyl hydrolase
SCNpilot_expt_500_p_scaffold_211_curated_76
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

92065..92787
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KZ15_PARAV
Uncharacterized protein {ECO:0000313|EMBL:CDZ79641.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_211_curated_77
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

92950..93318
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MEE4_PARUW
Putative enzyme related to lactoylglutathione lyase {ECO:0000313|EMBL:CDZ79642.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_211_curated_78
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

93315..93578
DNA (264bp) protein (88aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ79643.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_211_curated_79
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(93556..94623)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KZX7_PARAV
Putative oxidoreductasec/MT0587 {ECO:0000313|EMBL:CDZ79644.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_211_curated_80
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(94625..95305)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KZX8_PARAV
Bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase {ECO:0000313|EMBL:CDZ79645.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_211_curated_81
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(95298..96386)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KZX9_PARAV
Alpha-pyrone synthesis polyketide synthase-like Pks18 {ECO:0000313|EMBL:CDZ79646.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_211_curated_82
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

96566..96973
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A69A0
Putative membrane protein {ECO:0000313|EMBL:CDZ79647.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_211_curated_83
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(97012..97854)
DNA (843bp) protein (281aa)
Short chain dehydrogenase family protein n=4 Tax=Chlamydophila psittaci RepID=J9XCW5_CHLPS
Bacilysin biosynthesis oxidoreductase YwfH {ECO:0000313|EMBL:CDZ79648.1}; Flags: Precursor;; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
short chain dehydrogenase family protein
SCNpilot_expt_500_p_scaffold_211_curated_84
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(97865..98743)
DNA (879bp) protein (293aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ79649.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
seg 8..20 id=125255 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
SCNpilot_expt_500_p_scaffold_211_curated_85
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(99034..100515)
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KUX0_PARAV
Outer membrane protein OprM {ECO:0000313|EMBL:CDZ79651.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_211_curated_86
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(100522..103662)
DNA (3141bp) protein (1047aa)
Putative glycosyl hydrolase n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A2N5_DEIPD
Glycosyl hydrolase family 81 {ECO:0000313|EMBL:CDZ79652.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
glycosyl hydrolase
SCNpilot_expt_500_p_scaffold_211_curated_87
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(103673..106753)
DNA (3081bp) protein (1027aa)
Acriflavin resistance protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G432_GEOUR
Multidrug transporter MdtB {ECO:0000313|EMBL:CDZ79653.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
SCNpilot_expt_500_p_scaffold_211_curated_88
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(106757..107851)
DNA (1095bp) protein (365aa)
Multidrug resistance protein mdtA n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L4X5_SIMNZ
Multidrug transporter MdtA {ECO:0000313|EMBL:CDZ79654.1}; Flags: Precursor;; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
mdtA; multidrug resistance protein mdtA; K07799 putative multidrug efflux transporter MdtA
SCNpilot_expt_500_p_scaffold_211_curated_89
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(107848..109335)
DNA (1488bp) protein (496aa)
Type I secretion outer membrane protein, TolC family n=1 Tax=delta proteobacterium NaphS2 RepID=D8F7Y7_9DELT
Outer membrane protein OprM {ECO:0000313|EMBL:CDZ79655.1}; Flags: Precursor;; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
outer membrane efflux family protein
SCNpilot_expt_500_p_scaffold_211_curated_90
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

110027..110443
DNA (417bp) protein (139aa)
UPI0003A054C9 related cluster n=1 Tax=unknown RepID=UPI0003A054C9
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
mscL; Large-conductance mechanosensitive channel; K03282 large conductance mechanosensitive channel
Displaying items 61-90 of 186 in total

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