ggKbase home page

SCNpilot_expt_500_p_scaffold_211_curated

Search features with annotation key words

Displaying items 121-150 of 186 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_211_curated_121
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(147011..147202)
DNA (192bp) protein (64aa)
Uncharacterized protein n=2 Tax=Waddlia chondrophila RepID=D6YTZ3_WADCW
Uncharacterized protein {ECO:0000313|EMBL:CDZ79687.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_211_curated_122
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

147389..147958
DNA (570bp) protein (190aa)
Elongation factor P 2 n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=EFP2_PARUW
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
efp; elongation factor P; K02356 elongation factor P
SCNpilot_expt_500_p_scaffold_211_curated_123
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

147939..148904
DNA (966bp) protein (322aa)
yjeA; hypothetical protein; K04568 lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RAE4_9CHLA
Elongation factor P--(R)-beta-lysine ligase {ECO:0000313|EMBL:CDZ79689.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_211_curated_124
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(148912..150144)
DNA (1233bp) protein (411aa)
Permease, major facilitator superfamily n=1 Tax=Waddlia chondrophila 2032/99 RepID=F8LAK7_9CHLA
Major Facilitator Superfamily protein {ECO:0000313|EMBL:CDZ79690.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
permease, major facilitator superfamily
SCNpilot_expt_500_p_scaffold_211_curated_125
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(150222..151889)
DNA (1668bp) protein (556aa)
nadE; glutamine-dependent NAD(+) synthetase; K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
Putative glutamine-dependent NAD(+) synthetase n=2 Tax=Parachlamydia acanthamoebae RepID=F8KWJ8_PARAV
Glutamine-dependent NAD(+) synthetase {ECO:0000313|EMBL:CDZ79691.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_211_curated_126
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(151901..153232)
DNA (1332bp) protein (444aa)
Na(+)-translocating NADH-quinone reductase subunit F {ECO:0000256|HAMAP-Rule:MF_00430}; Short=Na(+)-NQR subunit F {ECO:0000256|HAMAP-Rule:MF_00430};; Short=Na(+)-translocating NQR subunit F {ECO:0000256|HAMAP-Rule:MF_00430};; EC=1.6.5.8 {ECO:0000256|HAMAP-Rule:MF_00430};; NQR complex subunit F {ECO:0000256|HAMAP-Rule:MF_00430}; NQR-1 subunit F {ECO:0000256|HAMAP-Rule:MF_00430}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlam
nqrF; Na(+)-translocating NADH-quinone reductase subunit F; K00351 Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:1.6.5.-]
Putative Na(+)-translocating NADH-quinone reductase subunit F n=2 Tax=Parachlamydia acanthamoebae RepID=F8KWJ9_PARAV
SCNpilot_expt_500_p_scaffold_211_curated_127
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

153369..156026
DNA (2658bp) protein (886aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MF04_PARUW
Mannosyl oligosaccharide glucosidase {ECO:0000313|EMBL:CDZ79693.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_211_curated_128
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(156023..156775)
DNA (753bp) protein (251aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ79694.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_211_curated_129
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(156946..157701)
DNA (756bp) protein (252aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ79695.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_211_curated_130
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(157716..158453)
DNA (738bp) protein (246aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ79696.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_211_curated_131
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(158479..159480)
DNA (1002bp) protein (334aa)
IncA protein {ECO:0000313|EMBL:CDZ79697.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_211_curated_132
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

159790..161646
DNA (1857bp) protein (619aa)
Chaperone protein htpG n=2 Tax=Parachlamydia acanthamoebae RepID=F8L2E5_PARAV
High temperature protein G {ECO:0000313|EMBL:CDZ79698.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
htpG; chaperone protein htpG; K04079 molecular chaperone HtpG
SCNpilot_expt_500_p_scaffold_211_curated_133
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

161681..162850
DNA (1170bp) protein (390aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MAY9_PARUW
Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase {ECO:0000313|EMBL:CDZ79699.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_211_curated_134
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

162975..165164
DNA (2190bp) protein (730aa)
Uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8L2E1_PARAV
Serine/threonine-protein kinase pkn1 {ECO:0000313|EMBL:CDZ79700.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_211_curated_135
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

165244..165660
DNA (417bp) protein (139aa)
Chaperone protein SicP {ECO:0000313|EMBL:CDZ79702.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_211_curated_136
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

165663..167789
DNA (2127bp) protein (709aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ79703.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_211_curated_137
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

167799..168353
DNA (555bp) protein (185aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8L2D9_PARAV
Uncharacterized protein {ECO:0000313|EMBL:CDZ79704.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_211_curated_138
unknown

Not on your lists

168480..168659
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_211_curated_139
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

168663..168959
DNA (297bp) protein (99aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ79709.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_211_curated_140
R_Gammaproteobacteria_37_14, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

169147..169575
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZW68_9BACT
site-specific recombinase, DNA invertase Pin
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_37_14_curated
SCNpilot_expt_500_p_scaffold_211_curated_141
unknown

Not on your lists

comp(169472..170122)
DNA (651bp) protein (217aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_211_curated_142
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(170788..170997)
DNA (210bp) protein (70aa)
mRNA interferase YafQ {ECO:0000313|EMBL:CDZ79706.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_211_curated_143
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(170997..171278)
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6M9V3_PARUW
Uncharacterized protein {ECO:0000313|EMBL:CDZ79707.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_211_curated_144
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

171492..171788
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Yersinia enterocolitica RepID=UPI0003021690
Uncharacterized protein {ECO:0000313|EMBL:CDZ79709.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_211_curated_145
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(171924..172301)
DNA (378bp) protein (126aa)
UPF0092 membrane protein CT_741 n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L6D4_SIMNZ
Preprotein translocase subunit YajC {ECO:0000313|EMBL:CDZ79710.1}; Flags: Precursor;; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
yajC; hypothetical protein; K03210 preprotein translocase subunit YajC
SCNpilot_expt_500_p_scaffold_211_curated_146
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(172312..173412)
DNA (1101bp) protein (367aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
tgt; queuine tRNA-ribosyltransferase; K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29]
Queuine tRNA-ribosyltransferase n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8L2I3_PARAV
SCNpilot_expt_500_p_scaffold_211_curated_147
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(173409..174851)
DNA (1443bp) protein (481aa)
rumA1; 23S rRNA (uracil-5-)-methyltransferase; K00599 [EC:2.1.1.-]
23S rRNA (Uracil-5-)-methyltransferase n=1 Tax=Waddlia chondrophila (strain ATCC VR-1470 / WSU 86-1044) RepID=D6YTW8_WADCW
Putative RNA methyltransferase {ECO:0000313|EMBL:CDZ79712.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_211_curated_148
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(175014..175439)
DNA (426bp) protein (142aa)
Histone-like developmental protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8L2H6_PARAV
Histone H1-like protein HC1 {ECO:0000313|EMBL:CDZ79713.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hctA; histone-like developmental protein
SCNpilot_expt_500_p_scaffold_211_curated_149
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

175629..177140
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8L2H5_PARAV
Uncharacterized protein {ECO:0000313|EMBL:CDZ79714.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_211_curated_150
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

177169..177825
DNA (657bp) protein (219aa)
Putative biopolymer transport protein exbB n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MAX8_PARUW
Biopolymer transport protein ExbB {ECO:0000313|EMBL:CDZ79715.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
exbB; biopolymer transport protein exbB; K03561 biopolymer transport protein ExbB
Displaying items 121-150 of 186 in total

View Taxonomy