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SCNpilot_expt_500_p_scaffold_218_curated_5

Organism: scnpilot_dereplicated_Chlamydia_1

near complete RP 50 / 55 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(9431..10129)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=RL1_PARUW similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 232.0
  • Bit_score: 349
  • Evalue 3.40e-93
  • rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 232.0
  • Bit_score: 451
  • Evalue 8.90e-124
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 232.0
  • Bit_score: 349
  • Evalue 1.10e-93
  • rbh

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Taxonomy

Chlamydia sp. 'Rubis' → Chlamydia → Chlamydiales → Chlamydiia → Chlamydiae → Bacteria

Sequences

DNA sequence
Length: 699
ATGGCACGCCAAAGTAAAAGATTTCGGGAGATAGCTAAACTATTAGAGGCTAACAAAGTTTATTCTCTAAAAGACGCTATCGCTATGTTAAAGAAATGTCCGCCGGTCAAATTTGATCAGTCGATAGACATTGCTTTACAGATGGGCGTTGACCCTCGTAAGTCAGATCAGCAACTACGCGGAACAGTATCTTTACCGAATGGTACTGGTAAATCCATCACTATTTTAGTTTTAGCTAAAGGTGATAAAGTCAAAGAAGCGTTAGATGCTGGTGCAGAATATGCGGGCAATGATGAATTGATTGAAAAAATCAATAATGGGTGGACAGGCTTTGACGCAGTCATTGCAACACCAGATATGATGAGAGACGTAGGTAAACTCGGTAAAGTATTAGGTCCAAGAGGCTTAATGCCAACTCCAAAAGCTGGCACAGTAACCAATGATGTTGCAAAAGCAATTCAAGAAGTTAAAGCTGGTAAAATAGAGTTTAAACCAGATCGTCACGGTGTTGTAAGCAATGCTGTAGGAAAGCTCTCTTTTAGTGAAGAAGCTTTACAACAAAATATTTTAGCGTTAGCACAAGCGATCCAAAAAGCAAAACCAGCAGCAGCGAAAGGACAGTATGTAAAATCTGTCACTCTATCCTCAACAATGGGGCCAGGGTTAAAAATCGATGCACGCGATTTAGATATGTCATAA
PROTEIN sequence
Length: 233
MARQSKRFREIAKLLEANKVYSLKDAIAMLKKCPPVKFDQSIDIALQMGVDPRKSDQQLRGTVSLPNGTGKSITILVLAKGDKVKEALDAGAEYAGNDELIEKINNGWTGFDAVIATPDMMRDVGKLGKVLGPRGLMPTPKAGTVTNDVAKAIQEVKAGKIEFKPDRHGVVSNAVGKLSFSEEALQQNILALAQAIQKAKPAAAKGQYVKSVTLSSTMGPGLKIDARDLDMS*