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SCNpilot_expt_500_p_scaffold_350_curated_4

Organism: scnpilot_dereplicated_Chlamydia_1

near complete RP 50 / 55 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 2025..2774

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 249.0
  • Bit_score: 515
  • Evalue 4.10e-143
truA; tRNA-pseudouridine synthase I; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 248.0
  • Bit_score: 265
  • Evalue 1.70e-68
tRNA pseudouridine synthase A 2 n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=TRUA2_PARUW similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 248.0
  • Bit_score: 265
  • Evalue 5.30e-68

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Taxonomy

Chlamydia sp. 'Rubis' → Chlamydia → Chlamydiales → Chlamydiia → Chlamydiae → Bacteria

Sequences

DNA sequence
Length: 750
GTGCCCCTTAAGAATCTTCTTTTACATGTGGCTTATGATGGAACGAACTATCTTGGTTGGCAACTAACCAAAGAGGGTCCTAGCATAGAAGGTTGCTTAAAAAATGTTATCGAACAAATACTACAACATTCCGTTCAACTACAAGCTGCTAGTCGAACGGATGCGGGTGTTCATGCTAAAAACCAAACAGTCAATTTCTTTGTAGAGAAAGAATTTTGTGCTAAGCGACTTTTCATCAGCTTAAATCAGTTACTCCCAAAAGATATCAGAGTTTTAGAATTAAAAGATGTACCTTTAGATTTTCACCCCACACTACATTGTAAAGGTAAAACTTATACCTATCAAATTTGTTGTGGAAAAGTGCAACTTCCTTGCCATCGTCACTATTCTTGGCATGTGATAGAGATATTGGATGTTCCTTTAATGAAAGCTGCTTTACCTTCATTTATAGGTAGTCACGACTTTTCAGCCTTTTGTAATATGCGTAAAAACCTTAACTATGAACATTATATTCGTAATGTAGAATCTTTTGAATTAACAGAATTTGAGGATAATCGATTAGTTTTCAGAATTTCAGGAAATAATTTCTTATATAAAATGGTTCGCAATTTGGTAGGAACTGTTGTTGATATTGGAAGAAATCGTTTAAAAATTGAAGACATTCCCGACATCATTAACCAAAAAAGTAGAATAAAAGCTGGTATAACAGCACCAGCTCATGGCTTATGTCTTGAATTTATTCATTATTAA
PROTEIN sequence
Length: 250
VPLKNLLLHVAYDGTNYLGWQLTKEGPSIEGCLKNVIEQILQHSVQLQAASRTDAGVHAKNQTVNFFVEKEFCAKRLFISLNQLLPKDIRVLELKDVPLDFHPTLHCKGKTYTYQICCGKVQLPCHRHYSWHVIEILDVPLMKAALPSFIGSHDFSAFCNMRKNLNYEHYIRNVESFELTEFEDNRLVFRISGNNFLYKMVRNLVGTVVDIGRNRLKIEDIPDIINQKSRIKAGITAPAHGLCLEFIHY*