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SCNpilot_expt_500_p_scaffold_350_curated_41

Organism: scnpilot_dereplicated_Chlamydia_1

near complete RP 50 / 55 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 53697..55850

Top 3 Functional Annotations

Value Algorithm Source
Probable type III secretion pathway protein SctV n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MD76_PARUW similarity UNIREF
DB: UNIREF100
  • Identity: 83.5
  • Coverage: 726.0
  • Bit_score: 1177
  • Evalue 0.0
Invasion protein InvA {ECO:0000313|EMBL:CDZ80699.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 717.0
  • Bit_score: 1369
  • Evalue 0.0
sctV; type III secretion pathway protein SctV; K03230 type III secretion protein SctV similarity KEGG
DB: KEGG
  • Identity: 83.5
  • Coverage: 726.0
  • Bit_score: 1177
  • Evalue 0.0
  • rbh

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Taxonomy

Chlamydia sp. 'Rubis' → Chlamydia → Chlamydiales → Chlamydiia → Chlamydiae → Bacteria

Sequences

DNA sequence
Length: 2154
ATGGACTTTTTAAAACGAATTCTCGATGGAATAACGGGAAGGCTTGGAGGAGAAAGATCTGTCCAGGCCATATCTCGTAGTAGCGACATTGTATTGGCTCTGGTTATTATTGGTATTTTGGCTATGATCATTATACCTGTAAATCCTCATGTAATTGACTTTTTAATCGCGATAAATTTAACCATTTCTGTCGCTTTATTAATGGTTGGATTATATATCCCAAGTGCCACTCAGTTAACTATATTTCCTTCCTTATTACTGATAACAACCCTATATCGTTTAGGGGTAAACATTGCCTCAACAAGGCAAATTTTATTACATGCCAATGCAGGTGACATTATCTTTGGATTTGGTAACTTCGTGGTCGGTGGTAACTTTGTGGTCGGTGGTGTAATATTCTTAATCATTACTTTAGTTCAGTTCATTGTTATTACTAAGGGTGCTGAAAGGGTGGCTGAAGTTGCAGCTAGATTTACGTTGGATGCTATGCCTGGTAAGCAAATGAGTATCGATGCTGACATGAGAGCAGGCATACTAGATGCCAATCAAGCACGTGAAAGACGCTTAGCTTTACAAAAAGAAAGCCAATTGTATGGTGCCATGGATGGTGCTATGAAATTCGTTAAAGGTGATGCCATCGCAAGTATTGTTATCACTTTAATTAACGTTATTGGCGGTATGATCATTGGGATGACAATGAATGGGTTGTCTGCCGCCGACGCAGCAACTACCTACGCTATTTTGTCTATAGGTGATGGTCTTGTGTCCCAAATCCCAGCTTTGTTAATTGCTATTACTGCAGGTATTGTAACAACGCGTGTTTCAAGTGATGCAACCGATTCAAACCTTGGAACGGAAATTTCTGGCCAATTGCTTAAACAGCCTAAGGCTTTGATTATTTCGGCTGGGTTTTTAATGTGTTTAGGTATTGTTCCTGGATTTCCAAAAGCCCCTTTTATGATTATCTCCGCCTGCCTTGGACTTTTAGGATATGCCTTATTAAATGCTGAAAAGAAGAAAAGATCCGCATCTTCGGGAGTTACATCTGCTCTGGAAACGTCAACGGTGGATACATCTGTTCGGGGCCATAAAGCCGTAACTGGTGGCGGAGTTGATAATTACGCCTTGACTCTTCCTGTTGTTTTAGAATGTGGTAAGGGTTTAAGTGTAGAAATTCAAAAAGCTCAAAAAGGGCAGCAAAGCTTTATCGATCAAATGATCCCAAAAATGAGACAAGCTCTCTATGCTGATTTAGGTGTGCGTTTCCCTGGAGTTCACGTCAGAACCGACTCCCCTATTTTAGATGACGATGAGTATTCCATTCATTTAAATGAGGTTCCAATTGTTCGAGGAAAAGTCTTAAGAGGGTATGTTTTAACGAATGAAAACGAAGAAAATTTACGCCGTTATAACCTTCCCTATACTTCCTACAAAAACTCTTTAGGTTTACCTTCTCTTTGGGTAGAAGCTAAATATAAAGACATTTTGGATAAAGCTGGCATTCGCTATTGGACCCCATTAGAAGTGATGATTTTACACTTATCCTATTTCTTTAGACATTATGCCAATGAATTTGTGGGAATTCAAGAAGTCAAATCGATGCTGGAATTCATTGAAAAGTCTTTTCCCGATCTTGTCAAAGAAGTTACACGCCTTATACCCCTACAGAAAATGACTGATATTTTCAAACGCCTAATACAAGAACAAGTCTCTGTTCGTGATTTAAGAACAATATTAGAAGCTTTAAGTGAATGGGCTCAAACCGAAAAAGATACGGTATTATTAACAGAGTATGTACGCTCCTCTTTAAAACGCTACATTAGCTATAAATATTCTCAAGGACAATCTGTTTTATCAGTTTACATATTAGACCCTGAAATTGAAGATATGGTAAGAGGCGCTATTAAACAAACATCTGCCGGTTCTTACCTTGCATTAGATCCAGATTCTGTACAGCTCATTTTACAAGGTGTTAGGAATACGGTTTCTCCACCCCCACCTGGAGGGCAACCACCTGTTATTTTAACCGCGATCGACGTTAGAAGATTCGTTAGAAAATTAATTGAGATGGAATTTACTGATGTTTCAGTAGTTTCTTATCAAGAAATAGTCCCAGAAATCCGTATTCAACCTTTAGGAAGAATACAGTTATAA
PROTEIN sequence
Length: 718
MDFLKRILDGITGRLGGERSVQAISRSSDIVLALVIIGILAMIIIPVNPHVIDFLIAINLTISVALLMVGLYIPSATQLTIFPSLLLITTLYRLGVNIASTRQILLHANAGDIIFGFGNFVVGGNFVVGGVIFLIITLVQFIVITKGAERVAEVAARFTLDAMPGKQMSIDADMRAGILDANQARERRLALQKESQLYGAMDGAMKFVKGDAIASIVITLINVIGGMIIGMTMNGLSAADAATTYAILSIGDGLVSQIPALLIAITAGIVTTRVSSDATDSNLGTEISGQLLKQPKALIISAGFLMCLGIVPGFPKAPFMIISACLGLLGYALLNAEKKKRSASSGVTSALETSTVDTSVRGHKAVTGGGVDNYALTLPVVLECGKGLSVEIQKAQKGQQSFIDQMIPKMRQALYADLGVRFPGVHVRTDSPILDDDEYSIHLNEVPIVRGKVLRGYVLTNENEENLRRYNLPYTSYKNSLGLPSLWVEAKYKDILDKAGIRYWTPLEVMILHLSYFFRHYANEFVGIQEVKSMLEFIEKSFPDLVKEVTRLIPLQKMTDIFKRLIQEQVSVRDLRTILEALSEWAQTEKDTVLLTEYVRSSLKRYISYKYSQGQSVLSVYILDPEIEDMVRGAIKQTSAGSYLALDPDSVQLILQGVRNTVSPPPPGGQPPVILTAIDVRRFVRKLIEMEFTDVSVVSYQEIVPEIRIQPLGRIQL*