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SCNpilot_expt_500_p_scaffold_0_curated

Search features with annotation key words

Displaying items 1-30 of 990 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_0_curated_1
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

391..1275
DNA (885bp) protein (295aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KXD2_PARAV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB85610.1}; TaxID=765952 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source="Parachlamydia acanthamoebae (strain UV7).;"
SCNpilot_expt_500_p_scaffold_0_curated_2
unknown

Not on your lists

1348..1863
DNA (516bp) protein (172aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_0_curated_3
unknown

Not on your lists

2100..2552
DNA (453bp) protein (151aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_0_curated_4
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(2544..3836)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KZI5_PARAV
Uncharacterized protein {ECO:0000313|EMBL:KIC77081.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_0_curated_5
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

3952..4488
DNA (537bp) protein (179aa)
Uncharacterized protein n=2 Tax=Waddlia chondrophila RepID=D6YSM4_WADCW
Uncharacterized protein {ECO:0000313|EMBL:KIC76368.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_0_curated_6
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(4500..5492)
DNA (993bp) protein (331aa)
Putative arabinose 5-phosphate isomerase {ECO:0000313|EMBL:KIC76369.1}; EC=5.3.1.13 {ECO:0000313|EMBL:KIC76369.1};; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
hypothetical protein; K06041 arabinose-5-phosphate isomerase [EC:5.3.1.13]
Uncharacterized protein CPn_0526/CP_0226/CPj0526/CpB0547 n=2 Tax=Parachlamydia acanthamoebae RepID=F8KUZ9_PARAV
SCNpilot_expt_500_p_scaffold_0_curated_7
Waddlia chondrophila, Waddlia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

5565..7016
DNA (1452bp) protein (484aa)
icd; isocitrate dehydrogenase; K00031 isocitrate dehydrogenase [EC:1.1.1.42]
Isocitrate dehydrogenase {ECO:0000313|EMBL:ADI39071.1}; EC=1.1.1.42 {ECO:0000313|EMBL:ADI39071.1};; TaxID=716544 species="Bacteria; Chlamydiae; Chlamydiales; Waddliaceae; Waddlia.;" source="Waddlia chondrophila (strain ATCC VR-1470 / WSU 86-1044).;"
Isocitrate dehydrogenase n=2 Tax=Waddlia chondrophila RepID=D6YSM6_WADCW
SCNpilot_expt_500_p_scaffold_0_curated_8
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(7080..10202)
DNA (3123bp) protein (1041aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
ileS; isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5]
Isoleucine--tRNA ligase n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KWS1_PARAV
SCNpilot_expt_500_p_scaffold_0_curated_9
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(10383..11591)
DNA (1209bp) protein (403aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MB07_PARUW
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAF24242.1}; TaxID=264201 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Protochlamydia amoebophila (strain UWE25).;"
SCNpilot_expt_500_p_scaffold_0_curated_10
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(11723..12445)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MB07_PARUW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAF24242.1}; TaxID=264201 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Protochlamydia amoebophila (strain UWE25).;"
SCNpilot_expt_500_p_scaffold_0_curated_11
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(12496..14670)
DNA (2175bp) protein (725aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MB09_PARUW
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAF24240.1}; TaxID=264201 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Protochlamydia amoebophila (strain UWE25).;"
SCNpilot_expt_500_p_scaffold_0_curated_12
unknown

Not on your lists

15838..16653
DNA (816bp) protein (272aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_0_curated_13
R_Chlamydiae_45_22, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

16650..17150
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C79C4
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Chlamydiae_45_22_curated
SCNpilot_expt_500_p_scaffold_0_curated_14
unknown

Not on your lists

17144..17263
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_0_curated_15
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17560..17988
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MLT3_CORCM
Superfamily II DNA/RNA helicase {ECO:0000313|EMBL:KIG18840.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_0_curated_16
unknown

Not on your lists

18091..18744
DNA (654bp) protein (218aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_0_curated_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19318..19764)
DNA (447bp) protein (149aa)
Uncharacterized protein id=1295742 bin=GWE1_T_denit_62_9 species=Phaeospirillum molischianum genus=Phaeospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_p_scaffold_0_curated_18
unknown

Not on your lists

20044..20367
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_0_curated_19
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

20364..21305
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI00036C4397
E3 ubiquitin-protein ligase SlrP {ECO:0000313|EMBL:CDZ81407.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
protein lap4
SCNpilot_expt_500_p_scaffold_0_curated_20
R_Chlamydiae_45_22, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

21318..21872
DNA (555bp) protein (185aa)
Uncharacterized protein n=4 Tax=Legionella pneumophila RepID=Q5WS09_LEGPA
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Chlamydiae_45_22_curated
SCNpilot_expt_500_p_scaffold_0_curated_21
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

21877..22356
DNA (480bp) protein (160aa)
Acetyltransferase, GNAT family {ECO:0000313|EMBL:CDR34106.1}; EC=2.3.1.- {ECO:0000313|EMBL:CDR34106.1};; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
yafP; N-acetyltransferase YafP; K03830 putative acetyltransferase [EC:2.3.1.-]
Uncharacterized N-acetyltransferase YafP n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KZU7_PARAV
SCNpilot_expt_500_p_scaffold_0_curated_22
R_Chlamydiae_49_9, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(23091..23879)
DNA (789bp) protein (263aa)
bla; beta-lactamase OXA-9; K01467 beta-lactamase [EC:3.5.2.6]
Beta-lactamase OXA-9 n=2 Tax=Parachlamydia acanthamoebae RepID=F8L030_PARAV
Tax=RIFCSPHIGHO2_12_FULL_Chlamydiae_49_9_curated
SCNpilot_expt_500_p_scaffold_0_curated_23
RLO_Pseudomonas_59_9, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24031..25461
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AQC0_PSERE
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_59_9_curated
SCNpilot_expt_500_p_scaffold_0_curated_24
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

25521..26381
DNA (861bp) protein (287aa)
Conserved putative secreted protein {ECO:0000313|EMBL:CDR33766.1}; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
SCNpilot_expt_500_p_scaffold_0_curated_25
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

26466..28994
DNA (2529bp) protein (843aa)
autotransporter, partial n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225A8CF
Uncharacterized protein {ECO:0000313|EMBL:CDZ81439.1}; Flags: Precursor;; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
triple helix repeat-containing collagen
SCNpilot_expt_500_p_scaffold_0_curated_26
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

29008..29670
DNA (663bp) protein (221aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ81438.1}; Flags: Precursor;; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
Putative uncharacterized protein id=4712646 bin=GWC2_Chlamydiae_50_10 species=Candidatus Protochlamydia amoebophila genus=Candidatus Protochlamydia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWC2_Chlamydiae_50_10 organism_group=Chlamydiae organism_desc=Good +
SCNpilot_expt_500_p_scaffold_0_curated_27
Legionella norrlandica, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29801..31780)
DNA (1980bp) protein (660aa)
hypothetical protein n=1 Tax=Legionella shakespearei RepID=UPI0003696F49
Uncharacterized protein {ECO:0000313|EMBL:KGP62276.1}; TaxID=1498499 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella norrlandica.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_0_curated_28
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

32209..32964
DNA (756bp) protein (252aa)
exoA; exodeoxyribonuclease; K01142 exodeoxyribonuclease III [EC:3.1.11.2]
Exodeoxyribonuclease {ECO:0000313|EMBL:CCB86471.1}; EC=3.1.11.2 {ECO:0000313|EMBL:CCB86471.1};; TaxID=765952 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source="Parachlamydia acanthamoebae (strain UV7).;"
Exodeoxyribonuclease n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KZW2_PARAV
SCNpilot_expt_500_p_scaffold_0_curated_29
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

33220..34080
DNA (861bp) protein (287aa)
Putative oxidoreductase YhdF {ECO:0000313|EMBL:KIC72077.1}; EC=1.-.-.- {ECO:0000313|EMBL:KIC72077.1};; TaxID=362787 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Candidatus Protochlamydia amoebophila.;"
short-chain dehydrogenase/reductase SDR (EC:1.1.1.100)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3MAE1_ANAVT
SCNpilot_expt_500_p_scaffold_0_curated_30
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(34120..34680)
DNA (561bp) protein (187aa)
Flavin reductase domain protein FMN-binding n=2 Tax=unclassified Opitutaceae RepID=H1IY26_9BACT
Putative DIM6/NTAB family protein {ECO:0000313|EMBL:EIQ01140.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
hypothetical protein
Displaying items 1-30 of 990 in total

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