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SCNpilot_cont_500_bf_scaffold_1847_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1847_curated_1
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(286..1737)
DNA (1452bp) protein (484aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GE20_9CYAN
Nitrate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIJ76710.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
taurine ABC transporter ATP-binding protein; K02049 NitT/TauT family transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_1847_curated_2
Fischerella sp. JSC-11, Fischerella, Stigonematales, Cyanobacteria, Bacteria

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comp(1829..3607)
DNA (1779bp) protein (593aa)
sulfonate ABC transporter permease n=1 Tax=Fischerella thermalis RepID=UPI0002F35AAB
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EHC19429.1}; TaxID=741277 species="Bacteria; Cyanobacteria; Stigonematales; Fischerella.;" source="Fischerella sp. JSC-11.;"
anion ABC transporter permease
SCNpilot_cont_500_bf_scaffold_1847_curated_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(4290..6230)
DNA (1941bp) protein (647aa)
Copper resistance protein CopC n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLB8_9CHLR
Copper resistance protein CopC {ECO:0000313|EMBL:EFH86568.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
copper resistance protein CopC; K14166 copper transport protein
SCNpilot_cont_500_bf_scaffold_1847_curated_4
unknown

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comp(6244..6681)
DNA (438bp) protein (146aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1847_curated_5
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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7231..8319
DNA (1089bp) protein (363aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFN8_9CHLR
GAF sensor signal transduction histidine kinase
SCNpilot_cont_500_bf_scaffold_1847_curated_6
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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8386..9174
DNA (789bp) protein (263aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EAH8_THECK
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:AGA57273.1}; TaxID=717605 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4).;"
SCNpilot_cont_500_bf_scaffold_1847_curated_7
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(9300..11381)
DNA (2082bp) protein (694aa)
Copper resistance protein CopC n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLB8_9CHLR
Copper resistance protein CopC {ECO:0000313|EMBL:EFH86568.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
copper resistance protein CopC; K14166 copper transport protein
SCNpilot_cont_500_bf_scaffold_1847_curated_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(11478..12191)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLB9_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH86569.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1847_curated_9
unknown

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12864..13538
DNA (675bp) protein (225aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1847_curated_10
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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13741..14433
DNA (693bp) protein (231aa)
Peptidoglycan-binding LysM n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4M4_SPHTD
peptidoglycan-binding LysM
Peptidoglycan-binding LysM {ECO:0000313|EMBL:ACZ39191.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_500_bf_scaffold_1847_curated_11
Synechococcus sp. PCC 6312, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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14797..16110
DNA (1314bp) protein (438aa)
Tat-translocated enzyme n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RTQ6_SYNP3
Tat-translocated enzyme
Tat-translocated enzyme {ECO:0000313|EMBL:AFY60492.1}; Flags: Precursor;; TaxID=195253 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27167 / PCC 6312).;"
SCNpilot_cont_500_bf_scaffold_1847_curated_12
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(16294..17226)
DNA (933bp) protein (311aa)
Polysaccharide deacetylase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IBZ7_9CHLR
Polysaccharide deacetylase {ECO:0000313|EMBL:EFO81259.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
polysaccharide deacetylase
Displaying 12 items

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