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SCNpilot_cont_500_bf_scaffold_236_curated

Search features with annotation key words

Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_236_curated_trna_1
unknown

Not on your lists

197..269
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_236_curated_1
RBG_16_OP11_Gottesmanbacteria_43_7_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

368..2602
DNA (2235bp) protein (745aa)
Conserved domain protein n=1 Tax=Propionibacterium acnes SK182B-JCVI RepID=F9NXK0_PROAA
Tax=RBG_16_OP11_Gottesmanbacteria_43_7_curated
SCNpilot_cont_500_bf_scaffold_236_curated_2
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

3098..4072
DNA (975bp) protein (325aa)
oxidoreductase (EC:1.-.-.-); K00344 NADPH2:quinone reductase [EC:1.6.5.5] rbh
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U008_9CHLR
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:EFH82148.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
SCNpilot_cont_500_bf_scaffold_236_curated_3
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

4276..5202
DNA (927bp) protein (309aa)
putative cytidylate kinase id=7200562 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
putative cytidylate kinase
Tax=RIFOXYC12_FULL_TA06_54_24_curated
SCNpilot_cont_500_bf_scaffold_236_curated_4
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(5518..7446)
DNA (1929bp) protein (643aa)
Fibronectin-binding A domain protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UZA2_ROSS1
fibronectin-binding A domain-containing protein
Fibronectin-binding A domain protein {ECO:0000313|EMBL:ABQ91955.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
SCNpilot_cont_500_bf_scaffold_236_curated_5
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

7618..8757
DNA (1140bp) protein (380aa)
Histone deacetylase superfamily n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFG1_THET1
histone deacetylase superfamily protein; K04768 acetoin utilization protein AcuC
Tax=RBG_16_Archaea_50_20_curated
SCNpilot_cont_500_bf_scaffold_236_curated_6
Peptococcaceae bacterium SCADC1_2_3, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8757..10181
DNA (1425bp) protein (475aa)
Uncharacterized protein {ECO:0000313|EMBL:KFD41521.1}; TaxID=1487582 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium SCADC1_2_3.;"
SCNpilot_cont_500_bf_scaffold_236_curated_7
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10178..10672)
DNA (495bp) protein (165aa)
GCN5-related N-acetyltransferase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HI09_ANADF
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABS28355.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
SCNpilot_cont_500_bf_scaffold_236_curated_8
archaeon Loki, Lokiarchaeota, Archaea

Not on your lists

comp(10892..11725)
DNA (834bp) protein (278aa)
alpha/beta hydrolase fold containing protein n=1 Tax=Ruegeria conchae RepID=UPI00023793CF
Proline iminopeptidase {ECO:0000313|EMBL:KKK45007.1}; TaxID=1538547 species="Archaea; Lokiarchaeota; 'Lokiarchaeum'.;" source="archaeon Loki.;"
proline iminopeptidase
SCNpilot_cont_500_bf_scaffold_236_curated_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(12055..13380)
DNA (1326bp) protein (442aa)
Major facilitator superfamily MFS_1 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVX8_9CHLR
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFH84361.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
tetA; tetracycline resistance protein, class C
SCNpilot_cont_500_bf_scaffold_236_curated_10
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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14148..14765
DNA (618bp) protein (206aa)
Signal transduction histidine kinase n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5E1F0_9FIRM
Signal transduction histidine kinase {ECO:0000313|EMBL:CCU79674.1}; TaxID=1293054 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643.;"
SCNpilot_cont_500_bf_scaffold_236_curated_11
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14766..16778
DNA (2013bp) protein (671aa)
helicase c2; K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12]
helicase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036031C5
Uncharacterized protein {ECO:0000313|EMBL:KFN47318.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
SCNpilot_cont_500_bf_scaffold_236_curated_12
unknown

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16801..17295
DNA (495bp) protein (165aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_236_curated_13
Paenibacillus alvei, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17412..18404
DNA (993bp) protein (331aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1117108 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus alvei TS-15.;"
GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47]
GDP-mannose 4,6-dehydratase n=1 Tax=Paenibacillus alvei TS-15 RepID=S9SQ79_PAEAL
SCNpilot_cont_500_bf_scaffold_236_curated_14
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

18761..21100
DNA (2340bp) protein (780aa)
N-acetylmuramoyl-L-alanine amidase family 2 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C735_SPHTD
N-acetylmuramoyl-L-alanine amidase family 2 protein
N-acetylmuramoyl-L-alanine amidase family 2 {ECO:0000313|EMBL:ACZ37796.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_500_bf_scaffold_236_curated_15
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21430..22350
DNA (921bp) protein (307aa)
NADPH:quinone reductase n=1 Tax=Actinoplanes globisporus RepID=UPI00035E3EF7
Putative oxidoreductase {ECO:0000313|EMBL:CDO08905.1}; TaxID=258533 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
NADPH:quinone reductase-related Zn-dependent oxidoreductase
SCNpilot_cont_500_bf_scaffold_236_curated_16
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(22402..22956)
DNA (555bp) protein (185aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U2M5_9CHLR
bifunctional deaminase-reductase domain-containing protein
Tax=RBG_16_Chloroflexi_54_11_curated
SCNpilot_cont_500_bf_scaffold_236_curated_17
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

23422..24345
DNA (924bp) protein (308aa)
ATP phosphoribosyltransferase (EC:2.4.2.17); K00765 ATP phosphoribosyltransferase [EC:2.4.2.17]
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
ATP phosphoribosyltransferase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CF69_THET1
SCNpilot_cont_500_bf_scaffold_236_curated_18
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24360..25232
DNA (873bp) protein (291aa)
Gll3081 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NC98_GLOVI
Uncharacterized protein {ECO:0000313|EMBL:ETX08879.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein; K07140
SCNpilot_cont_500_bf_scaffold_236_curated_19
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

Not on your lists

comp(25545..25919)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B4110D
Tax=RBG_13_Aminicenantes_62_12_curated
SCNpilot_cont_500_bf_scaffold_236_curated_20
Virgibacillus sp. Vm-5, Virgibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26124..26453
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Virgibacillus sp. CM-4 RepID=T0JBX8_9BACI
Lineage-specific thermal regulator protein {ECO:0000313|EMBL:CDQ37985.1}; TaxID=1462526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Virgibacillus.;" source="Virgibacillus sp. Vm-5.;"
PadR-like family transcriptional regulator; K10947 PadR family transcriptional regulator, regulatory protein PadR
SCNpilot_cont_500_bf_scaffold_236_curated_21
Virgibacillus sp. Vm-5, Virgibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26472..27194
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Virgibacillus sp. CM-4 RepID=T0JK81_9BACI
Type III effector pipB2 {ECO:0000313|EMBL:CDQ37984.1}; TaxID=1462526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Virgibacillus.;" source="Virgibacillus sp. Vm-5.;"
pentapeptide repeat-containing protein
SCNpilot_cont_500_bf_scaffold_236_curated_22
unknown

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27516..28247
DNA (732bp) protein (244aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_236_curated_23
unknown

Not on your lists

28634..29314
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Halarchaeum acidiphilum RepID=UPI00037ABC20
SCNpilot_cont_500_bf_scaffold_236_curated_24
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

29766..30626
DNA (861bp) protein (287aa)
Putative uncharacterized protein n=2 Tax=Chloroflexus RepID=A9WD79_CHLAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABY35046.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
SCNpilot_cont_500_bf_scaffold_236_curated_25
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

30633..31469
DNA (837bp) protein (279aa)
biotin--acetyl-CoA-carboxylase ligase; K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
Biotin--acetyl-CoA-carboxylase ligase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B854_HERA2
Biotin--acetyl-CoA-carboxylase ligase {ECO:0000313|EMBL:ABX05987.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
SCNpilot_cont_500_bf_scaffold_236_curated_26
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

31488..32243
DNA (756bp) protein (252aa)
HAD family hydrolase; K07025 putative hydrolase of the HAD superfamily id=1250401 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
HAD family hydrolase; K07025 putative hydrolase of the HAD superfamily
Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
SCNpilot_cont_500_bf_scaffold_236_curated_27
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32764..33561
DNA (798bp) protein (266aa)
Cytochrome c biogenesis protein, transmembrane region {ECO:0000313|EMBL:CCQ73756.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
Cytochrome c biogenesis protein transmembrane region id=4543171 bin=GWA2_OP3_52_12 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
cytochrome C biogenesis protein, transmembrane region; K06196 cytochrome c-type biogenesis protein
SCNpilot_cont_500_bf_scaffold_236_curated_28
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

33594..34205
DNA (612bp) protein (204aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1I9V2_9CHLR
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:EFO81954.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
alkyl hydroperoxide reductase
SCNpilot_cont_500_bf_scaffold_236_curated_29
unknown

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34391..35356
DNA (966bp) protein (322aa)

This feature has no annotations

Displaying items 1-30 of 87 in total

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