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SCNpilot_cont_500_bf_scaffold_230_curated

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_230_curated_1
RLO_PLX_64_10, Bacteria

Not on your lists

466..1263
DNA (798bp) protein (266aa)
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EU00_9BACT
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCNpilot_cont_500_bf_scaffold_230_curated_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

1432..2667
DNA (1236bp) protein (412aa)
L-threonine synthase {ECO:0000313|EMBL:CDM65753.1}; EC=4.2.3.1 {ECO:0000313|EMBL:CDM65753.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
threonine synthase; K01733 threonine synthase [EC:4.2.3.1]
threonine synthase n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237B146
SCNpilot_cont_500_bf_scaffold_230_curated_3
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(2761..4011)
DNA (1251bp) protein (417aa)
WD40 repeat-containing protein n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UF34_9CYAN
WD40 repeat-containing protein {ECO:0000313|EMBL:EGK88686.1}; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatus FGP-2.;"
WD40 repeat-containing protein
SCNpilot_cont_500_bf_scaffold_230_curated_4
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(4004..4630)
DNA (627bp) protein (209aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NKI5_ROSCS
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABU58005.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
SCNpilot_cont_500_bf_scaffold_230_curated_5
GWC2_OD1-i_37_82, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

4836..5273
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Lysinibacillus sphaericus OT4b.31 RepID=R7ZD98_LYSSH
Lactoylglutathione lyase-like protein lyase {ECO:0000313|EMBL:KKQ45669.1}; TaxID=1618698 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_37_82.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_230_curated_6
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

5753..7027
DNA (1275bp) protein (425aa)
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase; K06131 cardiolipin synthase [EC:2.7.8.-]
phospholipase n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B47450
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-related enzyme {ECO:0000313|EMBL:AHY46061.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
SCNpilot_cont_500_bf_scaffold_230_curated_7
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7071..9041
DNA (1971bp) protein (657aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1); K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1]
Tyrosine--tRNA ligase n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9J1S4_9FIRM
SCNpilot_cont_500_bf_scaffold_230_curated_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9054..9809
DNA (756bp) protein (252aa)
Alpha/beta fold family hydrolase n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CAX6_9RHOB
hypothetical protein; K07020
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
SCNpilot_cont_500_bf_scaffold_230_curated_9
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

9811..10248
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EGH7_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF83789.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_230_curated_10
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10332..12530)
DNA (2199bp) protein (733aa)
Peptidase S53 propeptide n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBT9_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KEO84190.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
putative peptidase M53 family protein
SCNpilot_cont_500_bf_scaffold_230_curated_11
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12823..14691
DNA (1869bp) protein (623aa)
Uncharacterized protein n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6CXC1_PAESJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT00336.1}; TaxID=324057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. (strain JDR-2).;"
SCNpilot_cont_500_bf_scaffold_230_curated_12
unknown

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comp(14812..16539)
DNA (1728bp) protein (576aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_230_curated_13
unknown

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16747..17154
DNA (408bp) protein (136aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_230_curated_14
unknown

Not on your lists

17262..17456
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_230_curated_15

Not on your lists

comp(17531..18424)
DNA (894bp) protein (298aa)
Pirin domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7F9_NITGG rbh
Pirin {ECO:0000313|EMBL:AIA14084.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
pirin domain-containing protein
SCNpilot_cont_500_bf_scaffold_230_curated_16

Not on your lists

comp(18504..19097)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Bacillus cereus BAG6X1-2 RepID=J7Y688_BACCE
VanZ like family {ECO:0000313|EMBL:AIA13106.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
VanZ family protein
SCNpilot_cont_500_bf_scaffold_230_curated_17
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

19618..21264
DNA (1647bp) protein (549aa)
ABC transporter related n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B442_HERA2
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABX07575.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
SCNpilot_cont_500_bf_scaffold_230_curated_18
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

Not on your lists

21542..23137
DNA (1596bp) protein (532aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTX3_9CHLR
signal transduction histidine kinase
Tax=RBG_13_Chloroflexi_50_21_curated
SCNpilot_cont_500_bf_scaffold_230_curated_19
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(23146..24207)
DNA (1062bp) protein (354aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2R9_SPHTD
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ACZ38536.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_500_bf_scaffold_230_curated_20
R_RIF_OD1_01_42_19, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(24691..25260)
DNA (570bp) protein (190aa)
hypothetical protein id=120366 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_01_42_19_curated
SCNpilot_cont_500_bf_scaffold_230_curated_21
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25327..27144)
DNA (1818bp) protein (606aa)
integral membrane sensor signal transduction histidine kinase; K02484 two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S4Q6_GEOOG
SCNpilot_cont_500_bf_scaffold_230_curated_22
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

comp(27156..27866)
DNA (711bp) protein (237aa)
OmpR family two-component response regulator id=2466130 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
two component transcriptional regulator, winged helix family
Tax=RBG_16_Chloroflexi_64_43_curated
SCNpilot_cont_500_bf_scaffold_230_curated_23
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(27949..28725)
DNA (777bp) protein (259aa)
Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WI21_CHLAA
winged helix family two component transcriptional regulator
Tax=RBG_16_Chloroflexi_57_9_curated
SCNpilot_cont_500_bf_scaffold_230_curated_24
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(28876..29718)
DNA (843bp) protein (281aa)
Helix-turn-helix domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVI1_9CHLR
Helix-turn-helix domain protein {ECO:0000313|EMBL:EFH85384.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
helix-turn-helix domain-containing protein
SCNpilot_cont_500_bf_scaffold_230_curated_25
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

29905..30639
DNA (735bp) protein (245aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U2Y6_9CHLR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EFH82891.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
short-chain dehydrogenase
SCNpilot_cont_500_bf_scaffold_230_curated_26
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30725..31630)
DNA (906bp) protein (302aa)
Trehalose/maltose transport system, permease protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FLC9_SORC5
thuG; trehalose/maltose transport system, permease; K02026 multiple sugar transport system permease protein
Trehalose/maltose transport system, permease protein {ECO:0000313|EMBL:CAN95202.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_cont_500_bf_scaffold_230_curated_27
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31632..32564)
DNA (933bp) protein (311aa)
ABC transporter permease n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XLG7_SORCE
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AGP32625.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCNpilot_cont_500_bf_scaffold_230_curated_28
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(32808..34448)
DNA (1641bp) protein (547aa)
Extracellular solute-binding protein family 1 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4S9_SPHTD
extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ACZ39246.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_500_bf_scaffold_230_curated_29
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(35043..36062)
DNA (1020bp) protein (340aa)
LacI family transcriptional regulator (EC:5.1.1.1)
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACZ43110.1}; EC=5.1.1.1 {ECO:0000313|EMBL:ACZ43110.1};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
Transcriptional regulator, LacI family n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CH89_THET1
SCNpilot_cont_500_bf_scaffold_230_curated_30
unknown

Not on your lists

36149..36322
DNA (174bp) protein (58aa)

This feature has no annotations

Displaying items 1-30 of 96 in total

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