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SCNpilot_cont_500_bf_scaffold_284_curated

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_284_curated_1
unknown

Not on your lists

2..67
DNA (66bp) protein (22aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_284_curated_2
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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353..697
DNA (345bp) protein (115aa)
ATP-dependent transcriptional regulator, MalT-like, LuxR family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZN9_9CHLR
ATP-dependent transcriptional regulator, MalT-like, LuxR family {ECO:0000313|EMBL:EFH82029.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
ATP-dependent transcription regulator LuxR; K03556 LuxR family transcriptional regulator, maltose regulon positive regulatory protein
SCNpilot_cont_500_bf_scaffold_284_curated_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

911..1927
DNA (1017bp) protein (339aa)
Integrase family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U1R1_9CHLR
Integrase family protein {ECO:0000313|EMBL:EFH82705.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
xerD; tyrosine recombinase XerC
SCNpilot_cont_500_bf_scaffold_284_curated_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1955..3016
DNA (1062bp) protein (354aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INP5_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41505.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
SCNpilot_cont_500_bf_scaffold_284_curated_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(3013..4056)
DNA (1044bp) protein (348aa)
Transcriptional regulator, LacI family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5B1_9CHLR
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EFH81691.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_284_curated_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

4382..5536
DNA (1155bp) protein (385aa)
Oxidoreductase domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5B0_9CHLR
Oxidoreductase domain protein {ECO:0000313|EMBL:EFH81690.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
oxidoreductase domain-containing protein
SCNpilot_cont_500_bf_scaffold_284_curated_7
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

5547..6710
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Paenibacillus ginsengihumi RepID=UPI000379629B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABU58538.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
SCNpilot_cont_500_bf_scaffold_284_curated_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

6719..7540
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI00036432CA
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:EFH81688.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
xylose isomerase domain-containing protein
SCNpilot_cont_500_bf_scaffold_284_curated_9
unknown

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comp(7581..8378)
DNA (798bp) protein (266aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_284_curated_10
unknown

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comp(8472..9275)
DNA (804bp) protein (268aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_284_curated_11
unknown

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9417..9608
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_284_curated_12
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(9665..10951)
DNA (1287bp) protein (429aa)
Transcriptional regulator, XRE family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TF87_9CHLR
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EFH90487.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_284_curated_13
unknown

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comp(11305..11787)
DNA (483bp) protein (161aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_284_curated_14
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(12042..13463)
DNA (1422bp) protein (474aa)
Major facilitator superfamily MFS_1 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TKR3_9CHLR
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFH86363.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
multidrug-efflux transporter
SCNpilot_cont_500_bf_scaffold_284_curated_15
Dehalogenimonas sp. WBC-2, Dehalogenimonas, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(13468..13986)
DNA (519bp) protein (173aa)
Regulatory protein MarR n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0VWJ7_MYCFO
Transcriptional regulator MarR family {ECO:0000313|EMBL:AKG52735.1}; TaxID=943347 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalogenimonas.;" source="Dehalogenimonas sp. WBC-2.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_284_curated_16
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(14149..15072)
DNA (924bp) protein (308aa)
GCN5-related N-acetyltransferase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NMK1_ROSCS
N-acetyltransferase GCN5
Tax=BJP_IG2157_Anaerolineales_55_23
SCNpilot_cont_500_bf_scaffold_284_curated_17
unknown

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comp(15093..15419)
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_284_curated_18
unknown

Not on your lists

comp(15423..16118)
DNA (696bp) protein (232aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_284_curated_19

Not on your lists

16324..17895
DNA (1572bp) protein (524aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
Bifunctional purine biosynthesis protein PurH n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K285_DEHLB
Marine sediment metagenome DNA, contig: S12H4_C00252 {ECO:0000313|EMBL:GAI61641.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_cont_500_bf_scaffold_284_curated_20
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

17924..19033
DNA (1110bp) protein (370aa)
putative polyprenyl synthetase; K13787 geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Putative polyprenyl synthetase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2Z6_CALAS
Tax=RBG_16_Chloroflexi_64_32_curated
SCNpilot_cont_500_bf_scaffold_284_curated_21
unknown

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19113..19565
DNA (453bp) protein (151aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_284_curated_22
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

19964..20482
DNA (519bp) protein (173aa)
Translation initiation factor IF-3 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2Z1_SPHTD
translation initiation factor IF-3; K02520 translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_500_bf_scaffold_284_curated_23
unknown

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20633..21226
DNA (594bp) protein (198aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_284_curated_24
unknown

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21350..21994
DNA (645bp) protein (215aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_284_curated_25
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22021..24327)
DNA (2307bp) protein (769aa)
Uncharacterized protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FQC0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMS70688.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
alpha-L-fucosidase
SCNpilot_cont_500_bf_scaffold_284_curated_26
Talaromyces stipitatus, Talaromyces, Eurotiales, Eurotiomycetidae, Ascomycota, Fungi

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24677..25861
DNA (1185bp) protein (395aa)
Putative uncharacterized protein n=1 Tax=Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) RepID=B8LXC2_TALSN rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EED23203.1}; TaxID=441959 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Talaromyces.;" source="Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 /; NRRL 1006) (Penicillium stipitatum).;"
G-D-S-L family lipolytic protein
SCNpilot_cont_500_bf_scaffold_284_curated_27
Paenibacillus sp. HGF5, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(26051..26908)
DNA (858bp) protein (286aa)
Phytanoyl-CoA dioxygenase (PhyH) n=1 Tax=Paenibacillus sp. HGF5 RepID=F3M5I8_9BACL
Phytanoyl-CoA dioxygenase (PhyH) {ECO:0000313|EMBL:EGG37369.1}; TaxID=908341 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF5.;"
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin
SCNpilot_cont_500_bf_scaffold_284_curated_28
Paenibacillus dendritiformis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26936..27670)
DNA (735bp) protein (245aa)
Phytanoyl-CoA dioxygenase n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SHK9_9BACL
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:EHQ61469.1}; TaxID=1131935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus dendritiformis C454.;"
Phytanoyl-CoA dioxygenase
SCNpilot_cont_500_bf_scaffold_284_curated_29
Paenibacillus sp. Y412MC10, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27804..28688)
DNA (885bp) protein (295aa)
AraC family transcriptional regulator n=1 Tax=Paenibacillus elgii RepID=UPI000248D4B4
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACX63051.1}; TaxID=481743 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Geobacillus sp. (strain Y412MC10).;"
SCNpilot_cont_500_bf_scaffold_284_curated_30
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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comp(28769..30049)
DNA (1281bp) protein (427aa)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MJ46_9FIRM
glycoside hydrolase clan GH-D
Displaying items 1-30 of 70 in total

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