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SCNpilot_cont_500_bf_scaffold_459_curated

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_459_curated_1
unknown

Not on your lists

comp(2..283)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B7A5_HERA2
hypothetical protein
SCNpilot_cont_500_bf_scaffold_459_curated_2
unknown

Not on your lists

768..863
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_459_curated_3

Not on your lists

comp(893..1867)
DNA (975bp) protein (325aa)
Putative Beta-lactamase {ECO:0000313|EMBL:CBI00681.1}; EC=3.1.2.6 {ECO:0000313|EMBL:CBI00681.1};; Putative Hydroxyacylglutathione hydrolase {ECO:0000313|EMBL:CBH75046.1}; EC=3.1.2.6 {ECO:0000313|EMBL:CBH75046.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Putative Beta-lactamase n=1 Tax=mine drainage metagenome PF10_9ZZZZ">RepID=E6PF10_9ZZZZ
metallo-beta-lactamase
SCNpilot_cont_500_bf_scaffold_459_curated_4
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(1873..2886)
DNA (1014bp) protein (338aa)
Alpha/beta hydrolase fold-containing protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IBM0_9CHLR
Alpha/beta hydrolase fold-containing protein {ECO:0000313|EMBL:EFO81439.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_459_curated_5
RLO_PLX_64_10, Bacteria

Not on your lists

comp(3016..4203)
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037BA9D1
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCNpilot_cont_500_bf_scaffold_459_curated_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

4506..5849
DNA (1344bp) protein (448aa)
Transcriptional regulator, XRE family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TF87_9CHLR
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EFH90487.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
transcriptional regulator, XRE family
SCNpilot_cont_500_bf_scaffold_459_curated_7
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5866..8565)
DNA (2700bp) protein (900aa)
Serine/threonine protein kinase with WD40 repeats n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ADN0_THECD
serine/threonine protein kinase with WD40 repeats
Serine/threonine protein kinase with WD40 repeats {ECO:0000313|EMBL:ACY97490.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
SCNpilot_cont_500_bf_scaffold_459_curated_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(8697..10763)
DNA (2067bp) protein (689aa)
DEAD/DEAH box helicase; K10843 DNA excision repair protein ERCC-3 [EC:3.6.4.12]
Helicase domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJ25_9CHLR
Helicase domain protein {ECO:0000313|EMBL:EFH89432.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
SCNpilot_cont_500_bf_scaffold_459_curated_9
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10896..11432)
DNA (537bp) protein (179aa)
Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica (strain SH1) RepID=Q7UXJ4_RHOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAD72012.1}; TaxID=243090 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica (strain SH1).;"
SCNpilot_cont_500_bf_scaffold_459_curated_10
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

11649..12863
DNA (1215bp) protein (405aa)
ROK family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TSJ2_9CHLR
ROK family protein {ECO:0000313|EMBL:EFH83393.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
putative NagC family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_459_curated_11
Pontibacillus marinus, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12923..13822
DNA (900bp) protein (300aa)
Putative ABC transporter permease protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A3W9_9ACTN
Sugar ABC transporter permease {ECO:0000313|EMBL:KGX90820.1}; TaxID=1385511 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Pontibacillus.;" source="Pontibacillus marinus BH030004 = DSM 16465.;"
putative ABC transporter permease protein
SCNpilot_cont_500_bf_scaffold_459_curated_12
Pontibacillus marinus, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13922..14815
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI00037BB36E
Sugar ABC transporter permease {ECO:0000313|EMBL:KGX90821.1}; TaxID=1385511 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Pontibacillus.;" source="Pontibacillus marinus BH030004 = DSM 16465.;"
sugar ABC transporter permease; K02026 multiple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_459_curated_13
Pontibacillus marinus, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14928..16364
DNA (1437bp) protein (479aa)
Putative sugar-binding protein n=1 Tax=Sporosarcina globispora RepID=Q8RQV3_SPOGL
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGX90822.1}; TaxID=1385511 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Pontibacillus.;" source="Pontibacillus marinus BH030004 = DSM 16465.;"
extracellular solute-binding protein family 1 protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_459_curated_14
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

16395..17585
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI0003618081
hypothetical protein
Tax=GWB2_Chloroflexi_54_36_curated
SCNpilot_cont_500_bf_scaffold_459_curated_15
Sporosarcina globispora, Sporosarcina, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17662..20184
DNA (2523bp) protein (841aa)
Isomaltosyltransferase n=1 Tax=Sporosarcina globispora RepID=Q8RQV2_SPOGL
Isomaltosyltransferase {ECO:0000313|EMBL:BAB88401.1}; TaxID=1459 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Sporosarcina.;" source="Sporosarcina globispora (Bacillus globisporus).;"
alpha-glucosidase
SCNpilot_cont_500_bf_scaffold_459_curated_16
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20321..22330)
DNA (2010bp) protein (670aa)
beta-agarase (EC:3.2.1.81)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KCE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN39432.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
SCNpilot_cont_500_bf_scaffold_459_curated_17
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

22669..23721
DNA (1053bp) protein (351aa)
ArsR family transcriptional regulator n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N417_ANATU
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:BAJ63181.1}; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
SCNpilot_cont_500_bf_scaffold_459_curated_18
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

23986..25896
DNA (1911bp) protein (637aa)
Putative beta-xylosidase n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A0D1_DEIPD
beta-xylosidase
Putative beta-xylosidase {ECO:0000313|EMBL:AFZ66475.1}; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416; / KR-200).;"
SCNpilot_cont_500_bf_scaffold_459_curated_19
Gloeocapsa sp. PCC 73106, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(25893..26540)
DNA (648bp) protein (216aa)
Glycosyl transferase possibly involved in lipopolysaccharide synthesis n=1 Tax=Gloeocapsa sp. PCC 73106 RepID=L8LQE9_9CHRO
Glycosyl transferase possibly involved in lipopolysaccharide synthesis {ECO:0000313|EMBL:ELR99052.1}; Flags: Precursor;; TaxID=102232 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 73106.;"
putative glycosyltransferase
SCNpilot_cont_500_bf_scaffold_459_curated_20
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(26551..27711)
DNA (1161bp) protein (387aa)
UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IWN1_DESMD
UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase
Tax=CG_Arma_02
SCNpilot_cont_500_bf_scaffold_459_curated_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27822..28598)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Paenibacillus massiliensis RepID=UPI000375A362
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN97914.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_cont_500_bf_scaffold_459_curated_22
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28678..29688)
DNA (1011bp) protein (337aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1121428 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum hydrothermale Lam5 = DSM
purM; phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
phosphoribosylaminoimidazole synthetase n=1 Tax=Bacillus sp. L1(2012) RepID=UPI00034C6853
SCNpilot_cont_500_bf_scaffold_459_curated_23
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(29695..31146)
DNA (1452bp) protein (484aa)
amidophosphoribosyltransferase; K00764 amidophosphoribosyltransferase [EC:2.4.2.14]
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseif
Amidophosphoribosyltransferase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UZP4_ROSS1
SCNpilot_cont_500_bf_scaffold_459_curated_24
Pseudoalteromonas piscicida, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31143..32447)
DNA (1305bp) protein (435aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1117317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas piscicida JCM 20779.;"
phosphoribosylamine--glycine ligase n=1 Tax=Pseudoalteromonas flavipulchra RepID=UPI00029A9810
Phosphoribosylamine-glycine ligase
SCNpilot_cont_500_bf_scaffold_459_curated_25
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(32444..33103)
DNA (660bp) protein (220aa)
Putative 5'-phosphoribosylglycinamide formyltransferase n=1 Tax=Desmodus rotundus RepID=K9J057_DESRO
GART; phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
SCNpilot_cont_500_bf_scaffold_459_curated_26
unknown

Not on your lists

comp(33169..33363)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_459_curated_27

Not on your lists

comp(33454..34182)
DNA (729bp) protein (243aa)
RNA methyltransferase n=1 Tax=Paenibacillus sanguinis RepID=UPI0003824644
Marine sediment metagenome DNA, contig: S12H4_S01851 {ECO:0000313|EMBL:GAJ02450.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RNA methyltransferase, RsmE family
SCNpilot_cont_500_bf_scaffold_459_curated_28
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(34335..35315)
DNA (981bp) protein (327aa)
hypothetical protein; K07178 RIO kinase 1 [EC:2.7.11.1]
RIO-like kinase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TGB2_9CHLR
Tax=BJP_IG2157_Anaerolineales_55_23
SCNpilot_cont_500_bf_scaffold_459_curated_29
unknown

Not on your lists

comp(35520..35717)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_459_curated_30
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(35908..36405)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R9G9_PIRSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB17719.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
Displaying items 1-30 of 47 in total

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