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SCNpilot_cont_500_bf_scaffold_1042_curated

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1042_curated_1
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

92..1000
DNA (909bp) protein (303aa)
catechol 2,3 dioxygenase; K00446 catechol 2,3-dioxygenase [EC:1.13.11.2]
Catechol 2,3 dioxygenase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WR29_KYRT2
Catechol 2,3 dioxygenase {ECO:0000313|EMBL:ADG06759.1}; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) (Bacillus; tusciae).;"
SCNpilot_cont_500_bf_scaffold_1042_curated_2
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1073..2113
DNA (1041bp) protein (347aa)
Phenol 2-monooxygenase (EC:1.14.13.7)
Phenol 2-monooxygenase {ECO:0000313|EMBL:ACY96121.1}; EC=1.14.13.7 {ECO:0000313|EMBL:ACY96121.1};; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Phenol 2-monooxygenase n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A3J6_THECD
SCNpilot_cont_500_bf_scaffold_1042_curated_3
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2136..2447
DNA (312bp) protein (104aa)
Phenol hydroxylase P2 protein {ECO:0000313|EMBL:CCH73943.1}; EC=1.14.13.7 {ECO:0000313|EMBL:CCH73943.1};; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
hypothetical protein n=1 Tax=Mycobacterium avium RepID=UPI0002E1FE1C
monooxygenase component MmoB/DmpM
SCNpilot_cont_500_bf_scaffold_1042_curated_4
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2511..4016
DNA (1506bp) protein (502aa)
Methane/phenol/toluene hydroxylase n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A3J8_THECD
methane/phenol/toluene hydroxylase
Methane/phenol/toluene hydroxylase {ECO:0000313|EMBL:ACY96123.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
SCNpilot_cont_500_bf_scaffold_1042_curated_5
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4046..4381
DNA (336bp) protein (112aa)
Phenol hydroxylase subunit P4 n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A3J9_THECD
phenol hydroxylase subunit P4
Phenol hydroxylase subunit P4 {ECO:0000313|EMBL:ACY96124.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
SCNpilot_cont_500_bf_scaffold_1042_curated_6
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4591..5658
DNA (1068bp) protein (356aa)
Ferredoxin oxidoreductase n=1 Tax=uncultured bacterium RepID=C6KUI9_9BACT
Phenol hydroxylase {ECO:0000313|EMBL:KJS45502.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
ferredoxin:oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region
SCNpilot_cont_500_bf_scaffold_1042_curated_7
unknown

Not on your lists

5712..5930
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1042_curated_8
unknown

Not on your lists

comp(6023..6610)
DNA (588bp) protein (196aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1042_curated_9
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(6689..7573)
DNA (885bp) protein (295aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TN73_9CHLR
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Tax=RBG_13_Chloroflexi_60_9_curated
SCNpilot_cont_500_bf_scaffold_1042_curated_10
unknown

Not on your lists

comp(7703..9058)
DNA (1356bp) protein (452aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1042_curated_11
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(9068..10009)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NRJ7_GRAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEU37355.1}; Flags: Precursor;; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
SCNpilot_cont_500_bf_scaffold_1042_curated_12
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10277..11194
DNA (918bp) protein (306aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Pelosinus fermentans JBW45 RepID=I9NSY7_9FIRM
Transcriptional regulator with cupin sensor, AraC family {ECO:0000313|EMBL:AJQ28845.1}; TaxID=1192197 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans JBW45.;"
AraC family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1042_curated_13
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(11191..12093)
DNA (903bp) protein (301aa)
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EW01_9BACT
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin {ECO:0000313|EMBL:CCW35612.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
SCNpilot_cont_500_bf_scaffold_1042_curated_14
unknown

Not on your lists

12311..12829
DNA (519bp) protein (173aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1042_curated_15
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

12896..15442
DNA (2547bp) protein (849aa)
SMC domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4W6_SPHTD
SMC domain-containing protein; K03546 exonuclease SbcC
Tax=RBG_16_Chloroflexi_60_22_curated
SCNpilot_cont_500_bf_scaffold_1042_curated_16
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

15581..16180
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7L7_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ37850.1}; Flags: Precursor;; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_500_bf_scaffold_1042_curated_17
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

16496..18409
DNA (1914bp) protein (638aa)
chaperone protein DnaK (EC:1.3.1.74); K04043 molecular chaperone DnaK
Chaperone protein DnaK n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCZ1_THET1
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_cont_500_bf_scaffold_1042_curated_18
unknown

Not on your lists

comp(18835..19083)
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1042_curated_19
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

19495..20619
DNA (1125bp) protein (375aa)
Myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4]
Myo-inositol-1-phosphate synthase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEG0_THET1
Myo-inositol-1-phosphate synthase {ECO:0000313|EMBL:ACZ41316.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_cont_500_bf_scaffold_1042_curated_20
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

20820..21452
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QV78_CHLT3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF13032.1}; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (strain ATCC 35110 / GB-78).;"
SCNpilot_cont_500_bf_scaffold_1042_curated_21
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21495..22361
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IWR0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02257.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
glycoside hydrolase
SCNpilot_cont_500_bf_scaffold_1042_curated_22
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(22328..24367)
DNA (2040bp) protein (680aa)
Ferrous ion uptake system protein FeoB (Predicted GTPase) n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8R8X7_THETN
FeoB3; ferrous ion uptake system protein FeoB ( GTPase); K04759 ferrous iron transport protein B rbh
Tax=BJP_IG2157_Anaerolineales_55_23
SCNpilot_cont_500_bf_scaffold_1042_curated_23
Enterococcus gilvus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24393..24650)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Enterococcus gilvus ATCC BAA-350 RepID=R2VHQ9_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOI57370.1}; TaxID=1158614 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus gilvus ATCC BAA-350.;"
FeoA family protein; K04758 ferrous iron transport protein A
SCNpilot_cont_500_bf_scaffold_1042_curated_24
unknown

Not on your lists

comp(24668..24937)
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UQS5_ROSS1
SCNpilot_cont_500_bf_scaffold_1042_curated_25
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

25246..26721
DNA (1476bp) protein (492aa)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-); K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000255|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000255|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000255|HAMAP-Rule:MF_00121};; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 /; Z-2901).;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=GATB_CARHZ rbh
SCNpilot_cont_500_bf_scaffold_1042_curated_26
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

26827..28089
DNA (1263bp) protein (421aa)
Glu/Leu/Phe/Val dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
Glutamate dehydrogenase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFL6_THET1
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_cont_500_bf_scaffold_1042_curated_27
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(28257..30401)
DNA (2145bp) protein (715aa)
Uncharacterized protein n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PKW6_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY33601.1}; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
SCNpilot_cont_500_bf_scaffold_1042_curated_28
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists


30712..30918
DNA (207bp) protein (69aa)
50S ribosomal protein L35 n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFH8_THET1
50S ribosomal protein L35; K02916 large subunit ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
SCNpilot_cont_500_bf_scaffold_1042_curated_29
Clostridium sp. CAG:417, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


31067..31453
DNA (387bp) protein (129aa)
50S ribosomal protein L20 n=2 Tax=root RepID=R6TRF4_9CLOT
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1262804 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:417.;"
ribosomal protein L20
SCNpilot_cont_500_bf_scaffold_1042_curated_30
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

31546..32562
DNA (1017bp) protein (339aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5US41_ROSS1
tRNA/rRNA methyltransferase SpoU; K03437 RNA methyltransferase, TrmH family
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:ABQ89444.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
Displaying items 1-30 of 46 in total

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