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scnpilot_cont_500_p_scaffold_483_curated

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_483_curated_1
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1094
DNA (1092bp) protein (364aa)
Uncharacterized protein (Fragment) n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X1B6_DELAC
Fibronectin type III domain protein {ECO:0000313|EMBL:EZP52285.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
fibronectin type III domain-containing protein
scnpilot_cont_500_p_scaffold_483_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1282..2502)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2W7D8_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD38839.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
major facilitator transporter
scnpilot_cont_500_p_scaffold_483_curated_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2804..3379
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WL14_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD38840.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_483_curated_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3425..3994)
DNA (570bp) protein (190aa)
Helix-turn-helix domain protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AYA1_DELSC
Helix-turn-helix family protein {ECO:0000313|EMBL:KFJ09183.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
helix-turn-helix domain-containing protein
scnpilot_cont_500_p_scaffold_483_curated_5
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4009..4920
DNA (912bp) protein (304aa)
membrane protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002F971D9
Membrane protein {ECO:0000313|EMBL:KEH08249.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_483_curated_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5071..5802
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XGJ7_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD38844.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
class I glutamine amidotransferase
scnpilot_cont_500_p_scaffold_483_curated_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5914..6723
DNA (810bp) protein (270aa)
DeoR family transcripitonal regulator n=1 Tax=Chryseobacterium taeanense RepID=UPI0002F411C6
Uncharacterized protein {ECO:0000313|EMBL:EPD38845.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
DeoR family transcriptional regulator
scnpilot_cont_500_p_scaffold_483_curated_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6758..7678
DNA (921bp) protein (307aa)
Ribose transport system substrate-binding protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WHP5_DELAC
Ribose transport system substrate-binding protein {ECO:0000313|EMBL:EPD38846.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
periplasmic binding protein/LacI transcriptional regulator; K10439 ribose transport system substrate-binding protein
scnpilot_cont_500_p_scaffold_483_curated_9
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7699..9255
DNA (1557bp) protein (519aa)
monosaccharide-transporting ATPase (EC:3.6.3.17); K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
Monosaccharide-transporting ATPase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AYA7_DELSC
D-ribose transporter ATP-binding protein {ECO:0000313|EMBL:KEH11443.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
scnpilot_cont_500_p_scaffold_483_curated_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9252..10298
DNA (1047bp) protein (349aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AYA8_DELSC
Branched-chain amino acid transport system / permease component family protein {ECO:0000313|EMBL:KFJ10555.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
ABC transporter permease; K10440 ribose transport system permease protein
scnpilot_cont_500_p_scaffold_483_curated_11
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10359..11327
DNA (969bp) protein (323aa)
fructokinase (EC:2.7.1.4)
sugar kinase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002EAC9FF
Sugar kinase {ECO:0000313|EMBL:KEH08246.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
scnpilot_cont_500_p_scaffold_483_curated_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11332..12669
DNA (1338bp) protein (446aa)
D-tagatose-bisphosphate aldolase non-catalytic subunit (EC:4.1.2.40); K00917 tagatose 6-phosphate kinase [EC:2.7.1.144]
D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WR35_DELAC
D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit {ECO:0000313|EMBL:EPD35162.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
scnpilot_cont_500_p_scaffold_483_curated_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12644..13558)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X1D2_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD38852.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_483_curated_14
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13677..14720
DNA (1044bp) protein (348aa)
membrane protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002ED1FB6
bile acid:sodium symporter; K14347 solute carrier family 10 (sodium/bile acid cotransporter), member 7
Bile acid:sodium symporter {ECO:0000313|EMBL:AEF90531.1}; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
scnpilot_cont_500_p_scaffold_483_curated_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14780..15880)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WAG9_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD35165.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_483_curated_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15877..16407)
DNA (531bp) protein (177aa)
acireductone dioxygenase ARD; K08967 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
acireductone dioxygenase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002FF6AF4
Acireductone dioxygenase {ECO:0000256|HAMAP-Rule:MF_01682, ECO:0000256|SAAS:SAAS00009702}; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase {ECO:0000256|HAMAP-Rule:MF_01682, ECO:0000256|SAAS:SAAS00090345}; Acireductone dioxygenase (Fe(2+)-requiring) {ECO:0000256|HAMAP-Rule:MF_01682}; Acireductone dioxygenase (Ni(2+)-requiring) {ECO:0000256|HAMAP-Rule:MF_01682}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
scnpilot_cont_500_p_scaffold_483_curated_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16412..17221)
DNA (810bp) protein (270aa)
Lipoprotein n=3 Tax=Delftia acidovorans RepID=A9BU97_DELAS
YaeC family lipoprotein; K02073 D-methionine transport system substrate-binding protein
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_483_curated_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17301..17966)
DNA (666bp) protein (222aa)
Binding-protein-dependent transport systems inner membrane component n=5 Tax=cellular organisms RepID=A9BU96_DELAS
ABC transporter permease; K02072 D-methionine transport system permease protein
D-methionine transport system permease {ECO:0000313|EMBL:EPD35168.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
scnpilot_cont_500_p_scaffold_483_curated_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17970..19016)
DNA (1047bp) protein (349aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
phosphonate-transporting ATPase (EC:3.6.3.28); K02071 D-methionine transport system ATP-binding protein
Methionine import ATP-binding protein MetN n=2 Tax=Delftia acidovorans RepID=S2WGK7_DELAC
scnpilot_cont_500_p_scaffold_483_curated_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19450..22371
DNA (2922bp) protein (974aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WAH6_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD35170.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit
scnpilot_cont_500_p_scaffold_483_curated_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22368..22955
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WL32_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD38860.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
2Fe-2S iron-sulfur cluster-binding domain-containing protein
scnpilot_cont_500_p_scaffold_483_curated_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22961..24418
DNA (1458bp) protein (486aa)
gluconate 2-dehydrogenase (EC:1.1.99.3)
Gluconate 2-dehydrogenase (Acceptor) {ECO:0000313|EMBL:ABX35807.1}; EC=1.1.99.3 {ECO:0000313|EMBL:ABX35807.1};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Gluconate 2-dehydrogenase (Acceptor) n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BU92_DELAS
scnpilot_cont_500_p_scaffold_483_curated_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24661..25566
DNA (906bp) protein (302aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2W6A1_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD38862.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
short-chain dehydrogenase/reductase SDR
scnpilot_cont_500_p_scaffold_483_curated_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25563..27068
DNA (1506bp) protein (502aa)
long-chain-fatty-acid--CoA ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
AMP-dependent synthetase and ligase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BU89_DELAS
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABX35804.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_cont_500_p_scaffold_483_curated_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27102..28079
DNA (978bp) protein (326aa)
Uncharacterized protein n=4 Tax=Delftia RepID=A9BU88_DELAS
hypothetical protein
Tripartite tricarboxylate transporter receptor family protein {ECO:0000313|EMBL:KFJ11255.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
scnpilot_cont_500_p_scaffold_483_curated_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28115..29029)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WL35_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD38865.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_483_curated_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29181..30185)
DNA (1005bp) protein (335aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AYC7_DELSC
hypothetical protein
Tripartite tricarboxylate transporter receptor family protein {ECO:0000313|EMBL:KFJ09382.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
scnpilot_cont_500_p_scaffold_483_curated_28
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30232..31191)
DNA (960bp) protein (320aa)
esterase n=1 Tax=Chryseobacterium taeanense RepID=UPI00035C25EB
hypothetical protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EZP53264.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
scnpilot_cont_500_p_scaffold_483_curated_29
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31324..32259
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WAI9_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD35180.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_483_curated_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32300..32788)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BU83_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX35798.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Displaying items 1-30 of 34 in total

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