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scnpilot_cont_500_p_scaffold_183_curated

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_183_curated_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..917
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WP26_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD41503.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_183_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(938..2080)
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002D2E14E
Uncharacterized protein {ECO:0000313|EMBL:EPD39093.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
glucose sorbosone dehydrogenase
scnpilot_cont_500_p_scaffold_183_curated_3
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2356..3057
DNA (702bp) protein (234aa)
Probable transcriptional regulatory protein HMPREF9701_02060 n=2 Tax=Delftia acidovorans RepID=S2WTW9_DELAC
Probable transcriptional regulatory protein GY15_05490 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_183_curated_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3139..3768)
DNA (630bp) protein (210aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9); K00761 uracil phosphoribosyltransferase [EC:2.4.2.9]
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
Uracil phosphoribosyltransferase n=4 Tax=Delftia RepID=UPP_DELAS rbh
scnpilot_cont_500_p_scaffold_183_curated_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3825..4844)
DNA (1020bp) protein (340aa)
pyridoxal-5'-phosphate-dependent protein subunit beta; K01754 threonine dehydratase [EC:4.3.1.19]
Threonine dehydratase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WLP0_DELAC
Threonine dehydratase {ECO:0000313|EMBL:EPD39090.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
scnpilot_cont_500_p_scaffold_183_curated_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4950..6473)
DNA (1524bp) protein (508aa)
Uncharacterized protein n=3 Tax=Bacteria RepID=S2WP30_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD41508.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein; K06915
scnpilot_cont_500_p_scaffold_183_curated_7
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6552..7271
DNA (720bp) protein (240aa)
Probable transcriptional regulatory protein Daci_3521 n=4 Tax=Delftia RepID=A9BWD7_DELAS
hypothetical protein
Probable transcriptional regulatory protein DelCs14_3298 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
scnpilot_cont_500_p_scaffold_183_curated_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7268..8551
DNA (1284bp) protein (428aa)
phosphoribosylamine/glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13]
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
Phosphoribosylamine--glycine ligase n=3 Tax=Delftia RepID=A9BWD8_DELAS
scnpilot_cont_500_p_scaffold_183_curated_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8556..9530
DNA (975bp) protein (325aa)
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coproporphyrinogenase {ECO:0000256|HAMAP-Rule:MF_00333};; EC=1.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00333};; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
coproporphyrinogen-III oxidase, aerobic (EC:1.3.3.3); K00228 coproporphyrinogen III oxidase [EC:1.3.3.3]
Coproporphyrinogen-III oxidase, aerobic n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WQB7_DELAC
scnpilot_cont_500_p_scaffold_183_curated_10
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9780..10532
DNA (753bp) protein (251aa)
Ribosomal silencing factor RsfS n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X8I6_DELAC
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
iojap family protein; K09710 ribosome-associated protein
scnpilot_cont_500_p_scaffold_183_curated_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10554..11021
DNA (468bp) protein (156aa)
rRNA large subunit methyltransferase; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
Ribosomal RNA large subunit methyltransferase H {ECO:0000255|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000255|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000255|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000255|HAMAP-Rule:MF_00658}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans
Ribosomal RNA large subunit methyltransferase H n=4 Tax=Delftia RepID=RLMH_DELAS rbh
scnpilot_cont_500_p_scaffold_183_curated_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11126..11740
DNA (615bp) protein (205aa)
Maf-like protein HMPREF9702_04269 n=2 Tax=Delftia acidovorans RepID=S2WH70_DELAC
Maf-like protein HMPREF9701_02069 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
maf protein; K06287 septum formation protein
scnpilot_cont_500_p_scaffold_183_curated_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11877..13367
DNA (1491bp) protein (497aa)
ribonuclease, Rne/Rng family; K08301 ribonuclease G [EC:3.1.26.-]
Ribonuclease, Rne/Rng family n=2 Tax=Delftia RepID=A9BWE3_DELAS
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:ABX36163.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_cont_500_p_scaffold_183_curated_14
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13547..15448
DNA (1902bp) protein (634aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AV19_DELSC
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEF90287.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
scnpilot_cont_500_p_scaffold_183_curated_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15458..16687
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WZB3_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43275.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
monooxygenase FAD-binding
scnpilot_cont_500_p_scaffold_183_curated_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16623..17618)
DNA (996bp) protein (332aa)
ABC transporter substrate-binding protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002D36064
Uncharacterized protein {ECO:0000313|EMBL:EPD39079.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_183_curated_17
unknown

Not on your lists

17960..18115
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_183_curated_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18052..20274)
DNA (2223bp) protein (741aa)
Iron complex outermembrane recepter protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XDF8_DELAC
Iron complex outermembrane recepter protein {ECO:0000313|EMBL:EPD43277.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
scnpilot_cont_500_p_scaffold_183_curated_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20349..21311)
DNA (963bp) protein (321aa)
AraC family transcriptional regulator n=1 Tax=Chryseobacterium taeanense RepID=UPI00031BCD2E
Uncharacterized protein {ECO:0000313|EMBL:EPD43278.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
AraC family transcriptional regulator
scnpilot_cont_500_p_scaffold_183_curated_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21395..22561)
DNA (1167bp) protein (389aa)
kynurenine--oxoglutarate transaminase (EC:2.6.1.7); K14287 methionine aminotransferase [EC:2.6.1.-]
Methionine aminotransferase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XUT1_DELAC
Methionine aminotransferase {ECO:0000313|EMBL:EPD43279.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_183_curated_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22620..23561)
DNA (942bp) protein (314aa)
LysR family transcriptional regulator, Cys regulon transcriptional activator n=3 Tax=Bacteria RepID=S2WLM8_DELAC
LysR family transcriptional regulator, Cys regulon transcriptional activator {ECO:0000313|EMBL:EPD39075.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
transcriptional regulator CysB-like protein; K13634 LysR family transcriptional regulator, cys regulon transcriptional activator
scnpilot_cont_500_p_scaffold_183_curated_22
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23626..24039)
DNA (414bp) protein (138aa)
cobalamin (vitamin B12) biosynthesis CbiX protein; K03795 sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
Sirohydrochlorin cobaltochelatase n=2 Tax=Delftia acidovorans RepID=S2WV30_DELAC
Cobalamin biosynthesis protein CbiX {ECO:0000313|EMBL:KEH14367.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
scnpilot_cont_500_p_scaffold_183_curated_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24050..25162)
DNA (1113bp) protein (371aa)
Lipopolysaccharide export system permease n=3 Tax=Bacteria RepID=S2WH63_DELAC
Lipopolysaccharide export system permease {ECO:0000313|EMBL:EPD39073.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
YjgP/YjgQ family permease; K11720 lipopolysaccharide export system permease protein
scnpilot_cont_500_p_scaffold_183_curated_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25159..26286)
DNA (1128bp) protein (376aa)
Lipopolysaccharide export system permease n=3 Tax=Bacteria RepID=S2WU03_DELAC
Lipopolysaccharide export system permease {ECO:0000313|EMBL:EPD43283.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
YjgP/YjgQ family permease; K07091 lipopolysaccharide export system permease protein
scnpilot_cont_500_p_scaffold_183_curated_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26310..27899
DNA (1590bp) protein (530aa)
cytosol aminopeptidase; K01255 leucyl aminopeptidase [EC:3.4.11.1]
Probable cytosol aminopeptidase n=2 Tax=Delftia acidovorans RepID=S2WID8_DELAC
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_183_curated_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27945..28376
DNA (432bp) protein (144aa)
DNA polymerase III chi subunit HolC; K02339 DNA polymerase III subunit chi [EC:2.7.7.7]
DNA polymerase III subunit chi n=2 Tax=Delftia acidovorans RepID=S2WLM2_DELAC
DNA polymerase III subunit chi {ECO:0000313|EMBL:EPD43285.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_183_curated_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28380..29195
DNA (816bp) protein (272aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WV33_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD39069.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_183_curated_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29249..30265)
DNA (1017bp) protein (339aa)
glyoxylate reductase (EC:1.1.1.26); K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]
D-3-phosphoglycerate dehydrogenase n=2 Tax=Delftia acidovorans RepID=S2WH59_DELAC
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EPD43287.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_183_curated_29
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30702..31346)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X1Y2_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD39067.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_183_curated_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31659..32045
DNA (387bp) protein (129aa)
Putative fluoride ion transporter CrcB n=2 Tax=Delftia acidovorans RepID=S2WID4_DELAC
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
CrcB protein; K06199 CrcB protein
Displaying items 1-30 of 63 in total

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