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scnpilot_cont_500_p_scaffold_3650_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_3650_curated_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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441..710
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BSQ4_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX34059.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_cont_500_p_scaffold_3650_curated_2
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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945..2771
DNA (1827bp) protein (609aa)
lipid a ABC exporter, fused ATPase and inner membrane subunits msba; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-]
Lipid A export permease/ATP-binding protein MsbA n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WP64_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
scnpilot_cont_500_p_scaffold_3650_curated_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3038..4033)
DNA (996bp) protein (332aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=A9BSP7_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD39000.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_3650_curated_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4425..4670)
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=A9BPV5_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD45483.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
scnpilot_cont_500_p_scaffold_3650_curated_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4667..5941)
DNA (1275bp) protein (425aa)
Conjugation TrbI family protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BPV6_DELAS
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10
Conjugation TrbI family protein {ECO:0000313|EMBL:ABX33075.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_cont_500_p_scaffold_3650_curated_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5944..6933)
DNA (990bp) protein (330aa)
P-type conjugative transfer protein TrbG n=3 Tax=Bacteria RepID=A9BPV7_DELAS
P-type conjugative transfer protein TrbG; K03204 type IV secretion system protein VirB9
P-type conjugative transfer protein TrbG {ECO:0000313|EMBL:ABX33076.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_cont_500_p_scaffold_3650_curated_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6930..7634)
DNA (705bp) protein (235aa)
Conjugal transfer protein n=2 Tax=Delftia acidovorans RepID=A9BPV8_DELAS
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5
Conjugal transfer protein {ECO:0000313|EMBL:ABX33077.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_cont_500_p_scaffold_3650_curated_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7653..9026)
DNA (1374bp) protein (458aa)
P-type conjugative transfer protein TrbL n=2 Tax=Delftia acidovorans RepID=A9BPV9_DELAS
conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL
P-type conjugative transfer protein TrbL {ECO:0000313|EMBL:EPD45487.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
scnpilot_cont_500_p_scaffold_3650_curated_9
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9023..9322)
DNA (300bp) protein (100aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2X0B7_DELAC
putative lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:KEH08424.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
scnpilot_cont_500_p_scaffold_3650_curated_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9335..9958)
DNA (624bp) protein (208aa)
P-type conjugative transfer protein TrbJ n=3 Tax=Bacteria RepID=A9BPW1_DELAS
conjugal transfer protein TrbJ
P-type conjugative transfer protein TrbJ {ECO:0000313|EMBL:EPD45489.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
Displaying 10 items

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