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scnpilot_cont_500_p_scaffold_178_curated

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Displaying items 1-30 of 136 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_178_curated_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130..435)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WDZ7_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37983.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_178_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(619..1116)
DNA (498bp) protein (166aa)
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
RNA methyltransferase; K03216 tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
tRNA (cytidine(34)-2'-O)-methyltransferase n=2 Tax=Delftia acidovorans RepID=S2W6E3_DELAC
scnpilot_cont_500_p_scaffold_178_curated_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1169..1750)
DNA (582bp) protein (194aa)
phosphoribosyltransferase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002F54A6B
Uncharacterized protein {ECO:0000313|EMBL:EPD37985.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
phosphoribosyltransferase
scnpilot_cont_500_p_scaffold_178_curated_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2002..2904
DNA (903bp) protein (301aa)
biotin synthesis protein BioC; K02169 malonyl-CoA O-methyltransferase [EC:2.1.1.197]
Malonyl-CoA O-methyltransferase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WFC0_DELAC
Malonyl-CoA O-methyltransferase {ECO:0000313|EMBL:EPD37986.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
scnpilot_cont_500_p_scaffold_178_curated_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3650..4792
DNA (1143bp) protein (381aa)
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
cytochrome c oxidase subunit II; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1]
Cytochrome c oxidase subunit 2 n=2 Tax=Bacteria RepID=S2X4F2_DELAC
scnpilot_cont_500_p_scaffold_178_curated_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4828..6498
DNA (1671bp) protein (557aa)
cytochrome c oxidase subunit I; K02274 cytochrome c oxidase subunit I [EC:1.9.3.1]
Cytochrome c oxidase subunit I n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W9B7_DELAC
Cytochrome c oxidase subunit I {ECO:0000313|EMBL:EPD34825.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_178_curated_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6604..6711
DNA (108bp) protein (36aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2W6E8_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD34826.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_178_curated_8
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6740..7360
DNA (621bp) protein (207aa)
Cytochrome c oxidase assembly protein CtaG/Cox11 n=2 Tax=Delftia RepID=F6ASK8_DELSC
cytochrome c oxidase assembly protein CtaG/Cox11; K02258 cytochrome c oxidase assembly protein subunit 11
Cytochrome c oxidase assembly protein subunit 11 {ECO:0000313|EMBL:EZP50069.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
scnpilot_cont_500_p_scaffold_178_curated_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7357..7569
DNA (213bp) protein (71aa)
Putative transmembrane protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BSW1_DELAS
putative transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:ABX34321.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_cont_500_p_scaffold_178_curated_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7640..8521
DNA (882bp) protein (294aa)
cytochrome c oxidase subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1]
Cytochrome c oxidase subunit III n=2 Tax=Delftia acidovorans RepID=S2WYZ1_DELAC
Cytochrome c oxidase subunit III {ECO:0000313|EMBL:EPD34829.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_178_curated_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8591..8833)
DNA (243bp) protein (81aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2W9C2_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD34830.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
putative transmembrane protein
scnpilot_cont_500_p_scaffold_178_curated_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8863..9636
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XDV4_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37994.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
putative transmembrane cytochrome oxidase
scnpilot_cont_500_p_scaffold_178_curated_13
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9623..10312
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ASK3_DELSC
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEF91867.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
scnpilot_cont_500_p_scaffold_178_curated_14
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10512..11126
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WFD1_DELAC
Photosynthetic protein synthase I {ECO:0000313|EMBL:KEH08325.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
electron transport protein SCO1/SenC; K07152
scnpilot_cont_500_p_scaffold_178_curated_15
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11287..12882
DNA (1596bp) protein (532aa)
Pas/Pac sensor-containing methyl-accepting chemotaxis sensory transducer n=1 Tax=Chryseobacterium taeanense RepID=UPI00031674C1
Diguanylate cyclase {ECO:0000313|EMBL:KEH08326.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor; K03776 aerotaxis receptor
scnpilot_cont_500_p_scaffold_178_curated_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12879..14657
DNA (1779bp) protein (593aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WE13_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37998.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
PAS/PAC sensor-containing diguanylate cyclase
scnpilot_cont_500_p_scaffold_178_curated_17
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14782..15465)
DNA (684bp) protein (228aa)
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ASJ9_DELSC
putative Crp/Fnr family transcriptional regulator
Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:AEF91863.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
scnpilot_cont_500_p_scaffold_178_curated_18
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15693..16670)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WIJ9_DELAC
Uncharacterized protein {ECO:0000313|EMBL:KEH11705.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_178_curated_19
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16670..18631)
DNA (1962bp) protein (654aa)
3-oxoacyl-ACP synthase III; K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
3-oxoacyl-ACP synthase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002D4F3B8
3-oxoacyl-ACP synthase {ECO:0000313|EMBL:KEH11706.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
scnpilot_cont_500_p_scaffold_178_curated_20
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18647..19582)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WYZ9_DELAC
Fatty acid desaturase {ECO:0000313|EMBL:KEH11707.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
fatty acid desaturase
scnpilot_cont_500_p_scaffold_178_curated_21
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19579..20325)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WE17_DELAC
Desaturase {ECO:0000313|EMBL:KEH11708.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
fatty acid hydroxylase
scnpilot_cont_500_p_scaffold_178_curated_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20359..21351)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XDX2_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD38004.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_178_curated_23
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21457..22401)
DNA (945bp) protein (315aa)
RNA polymerase sigma factor RpoH n=2 Tax=Delftia acidovorans RepID=S2WIK5_DELAC
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
RNA polymerase sigma 32 subunit RpoH; K03089 RNA polymerase sigma-32 factor
scnpilot_cont_500_p_scaffold_178_curated_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22666..23733)
DNA (1068bp) protein (356aa)
alcohol dehydrogenase; K00004 (R,R)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.303]
Chlorophyll synthesis pathway protein BchC n=2 Tax=Delftia acidovorans RepID=S2W595_DELAC
Chlorophyll synthesis pathway protein BchC {ECO:0000313|EMBL:EPD34843.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_178_curated_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23803..25605)
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WYN3_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37892.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
flavin-containing monooxygenase; K07222 putative flavoprotein involved in K+ transport
scnpilot_cont_500_p_scaffold_178_curated_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25926..27884
DNA (1959bp) protein (653aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W9D8_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD34845.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
Fis family GAF modulated sigma54 specific transcriptional regulator
scnpilot_cont_500_p_scaffold_178_curated_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27980..28777)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XDI6_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37894.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
putative oxidoreductase, SDR family
scnpilot_cont_500_p_scaffold_178_curated_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28896..29795
DNA (900bp) protein (300aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WIA3_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD34847.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
transcriptional regulator, LysR family
scnpilot_cont_500_p_scaffold_178_curated_29
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29825..30817)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WF27_DELAC
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEH08382.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
putative Bug-like extra cytoplasmic solute receptor, TTT family
scnpilot_cont_500_p_scaffold_178_curated_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30891..31760)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X4H4_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD34849.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
alpha/beta hydrolase fold-containing protein
Displaying items 1-30 of 136 in total

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