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scnpilot_cont_500_p_scaffold_335_curated

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Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_335_curated_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..385
DNA (384bp) protein (128aa)
Peptidoglycan-binding lysin domain protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q2F0_ACIAP
LysM domain protein {ECO:0000313|EMBL:KFJ10367.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
peptidoglycan-binding lysin domain-containing protein
scnpilot_cont_500_p_scaffold_335_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(348..1520)
DNA (1173bp) protein (391aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CYF4_VARPS
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:KFJ10050.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hypothetical protein
scnpilot_cont_500_p_scaffold_335_curated_3
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1604..2452)
DNA (849bp) protein (283aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Variovorax sp. CF313 RepID=J2T2G4_9BURK
Sigma-28 {ECO:0000313|EMBL:EZP49889.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
FliA/WhiG subfamily RNA polymerase sigma-28 subunit; K02405 RNA polymerase sigma factor for flagellar operon FliA
scnpilot_cont_500_p_scaffold_335_curated_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2473..3222)
DNA (750bp) protein (250aa)
Flagellar biosynthetic protein FliP n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CYF2_VARPS
Flagellar biosynthetic protein FliP {ECO:0000313|EMBL:KFJ09205.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
flagellar biosynthetic protein FliP; K02419 flagellar biosynthetic protein FliP
scnpilot_cont_500_p_scaffold_335_curated_5
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3219..3635)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CYF1_VARPS
Flagellar biosynthesis protein, FliO {ECO:0000313|EMBL:EZP49887.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_335_curated_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3632..3970)
DNA (339bp) protein (113aa)
Putative flagellar motor switch protein n=1 Tax=Ralstonia solanacearum CMR15 RepID=D8NB96_RALSL
Surface presentation of antigens family protein {ECO:0000313|EMBL:KFJ08908.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
putative flagellar motor switch protein
scnpilot_cont_500_p_scaffold_335_curated_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4044..4913)
DNA (870bp) protein (290aa)
Surface presentation of antigens family protein {ECO:0000313|EMBL:KFJ08963.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
scnpilot_cont_500_p_scaffold_335_curated_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4917..6089)
DNA (1173bp) protein (391aa)
Flagellar basal-body rod protein FlgF n=1 Tax=Variovorax sp. CF313 RepID=J2T2G9_9BURK
Flagellar hook-basal body family protein {ECO:0000313|EMBL:KFJ11378.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hypothetical protein; K02390 flagellar hook protein FlgE
scnpilot_cont_500_p_scaffold_335_curated_9
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6115..6513)
DNA (399bp) protein (133aa)
Flagellar hook capping protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CYE7_VARPS
Flagellar basal-body rod modification protein FlgD {ECO:0000313|EMBL:EZP49883.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
flagellar hook capping protein; K02389 flagellar basal-body rod modification protein FlgD
scnpilot_cont_500_p_scaffold_335_curated_10

Not on your lists

comp(6510..7691)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Eimeria brunetti RepID=U6LQC5_9EIME
Marine sediment metagenome DNA, contig: S03H2_L09252 {ECO:0000313|EMBL:GAH32141.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_335_curated_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7688..8212)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Ralstonia solanacearum CMR15 RepID=D8NB91_RALSL
Uncharacterized protein {ECO:0000313|EMBL:KFJ08951.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hypothetical protein
scnpilot_cont_500_p_scaffold_335_curated_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8209..9720)
DNA (1512bp) protein (504aa)
ATPase FliI/YscN family protein {ECO:0000313|EMBL:KFJ08918.1}; EC=3.6.3.14 {ECO:0000313|EMBL:KFJ08918.1};; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
fliI; Flagellum-specific ATP synthase (EC:3.6.3.14)
Flagellum-specific ATP synthase n=1 Tax=Ralstonia solanacearum CMR15 RepID=D8NB90_RALSL
scnpilot_cont_500_p_scaffold_335_curated_13
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9717..10619)
DNA (903bp) protein (301aa)
Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U7B2_PHYPA
Flagellar assembly protein H {ECO:0000313|EMBL:EZP49878.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
flagellar assembly protein FliH; K02411 flagellar assembly protein FliH
scnpilot_cont_500_p_scaffold_335_curated_14
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10619..11236)
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CYE2_VARPS
Uncharacterized protein {ECO:0000313|EMBL:EZP49877.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_335_curated_15
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11233..12747)
DNA (1515bp) protein (505aa)
Flagellar M-ring protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CYE1_VARPS
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
flagellar M-ring protein FliF; K02409 flagellar M-ring protein FliF
scnpilot_cont_500_p_scaffold_335_curated_16
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12833..13171)
DNA (339bp) protein (113aa)
Flagellar hook-basal body complex protein FliE n=1 Tax=Ralstonia solanacearum CMR15 RepID=D8NB86_RALSL
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
fliE; Flagellar hook-basal body complex protein fliE
scnpilot_cont_500_p_scaffold_335_curated_17
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13168..13584)
DNA (417bp) protein (139aa)
Putative Flagellar basal-body rod protein FlgC n=1 Tax=Ralstonia solanacearum CMR15 RepID=D8NB85_RALSL
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
putative Flagellar basal-body rod protein FlgC
scnpilot_cont_500_p_scaffold_335_curated_18
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13596..13988)
DNA (393bp) protein (131aa)
Flagellar basal body rod protein FlgB n=1 Tax=Ralstonia solanacearum CMR15 RepID=D8NB84_RALSL
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
putative flagellar basal-body rod protein flgB
scnpilot_cont_500_p_scaffold_335_curated_19
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14013..15149)
DNA (1137bp) protein (379aa)
Flagellar P-ring protein n=1 Tax=Ralstonia syzygii R24 RepID=G3A731_9RALS
Flagellar P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Basal body P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Flags: Precursor;; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
flgI; Flagellar P-ring protein 1 precursor (Basal body P-ring protein 1)
scnpilot_cont_500_p_scaffold_335_curated_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15151..15750)
DNA (600bp) protein (200aa)
predicted protein n=1 Tax=Populus trichocarpa RepID=UPI000193E499
Flagellar L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Basal body L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hypothetical protein
scnpilot_cont_500_p_scaffold_335_curated_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15747..16778)
DNA (1032bp) protein (344aa)
Flagella basal body P-ring formation protein FlgA n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXN8_VARPS
Flagella basal body P-ring formation protein FlgA {ECO:0000313|EMBL:KFJ11293.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
flagella basal body P-ring formation protein FlgA; K02386 flagella basal body P-ring formation protein FlgA
scnpilot_cont_500_p_scaffold_335_curated_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16775..17569)
DNA (795bp) protein (265aa)
Flagellar basal-body rod protein flgG, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TBM8_RICCO
Flagellar basal-body rod protein FlgG {ECO:0000313|EMBL:KFJ11706.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
Flagellar basal-body rod protein flgG, putative
scnpilot_cont_500_p_scaffold_335_curated_23
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17687..18472)
DNA (786bp) protein (262aa)
predicted protein n=1 Tax=Populus trichocarpa RepID=UPI000193F4AF
Flagellar basal-body rod protein FlgG {ECO:0000313|EMBL:EZP49868.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_335_curated_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18510..20609)
DNA (2100bp) protein (700aa)
Flagellar biosynthesis protein FlhA n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXN5_VARPS
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:KFJ09328.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
flagellar biosynthesis protein FlhA; K02400 flagellar biosynthesis protein FlhA
scnpilot_cont_500_p_scaffold_335_curated_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20606..21688)
DNA (1083bp) protein (361aa)
Type III secretion exporter n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXN4_VARPS
FlhB HrpN YscU SpaS family protein {ECO:0000313|EMBL:KFJ09381.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
type III secretion exporter; K02401 flagellar biosynthetic protein FlhB
scnpilot_cont_500_p_scaffold_335_curated_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21688..22515)
DNA (828bp) protein (276aa)
Type III secretion system inner membrane R protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXN3_VARPS
Bacterial export s, 1 family protein {ECO:0000313|EMBL:KFJ11384.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
type III secretion system inner membrane R protein; K02421 flagellar biosynthetic protein FliR
scnpilot_cont_500_p_scaffold_335_curated_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22527..22793)
DNA (267bp) protein (89aa)
Flagellar biosynthesis pathway, component FliQ n=1 Tax=Variovorax sp. CF313 RepID=J3CIN1_9BURK
Bacterial export s, 3 family protein {ECO:0000313|EMBL:KFJ09468.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
export protein FliQ family 3
scnpilot_cont_500_p_scaffold_335_curated_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23137..24111)
DNA (975bp) protein (325aa)
cobalamin biosynthesis protein CobW n=1 Tax=Chryseobacterium taeanense RepID=UPI000300FBEC
Uncharacterized protein {ECO:0000313|EMBL:KFJ09396.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
cobalamin synthesis protein P47K
scnpilot_cont_500_p_scaffold_335_curated_29
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24108..25772)
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WDR2_DELAC
Amidohydrolase {ECO:0000313|EMBL:KEH07809.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
amidohydrolase 3; K07047
scnpilot_cont_500_p_scaffold_335_curated_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25787..27169)
DNA (1383bp) protein (461aa)
SSS family solute:Na+ symporter n=2 Tax=Delftia acidovorans RepID=S2W9K0_DELAC
SSS family solute:Na+ symporter {ECO:0000313|EMBL:EPD34905.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
Na+/solute symporter; K03307 solute:Na+ symporter, SSS family
Displaying items 1-30 of 54 in total

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