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scnpilot_cont_500_p_scaffold_80_curated

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Displaying items 1-30 of 198 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_80_curated_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(200..1201)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=3 Tax=Delftia RepID=S2WTT6_DELAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD40274.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_80_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1273..2481)
DNA (1209bp) protein (403aa)
fomryl-CoA transferase (EC:2.8.3.16)
Formyl-CoA transferase n=2 Tax=Delftia RepID=F6AYV0_DELSC
Uncharacterized protein {ECO:0000313|EMBL:EPD43187.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
scnpilot_cont_500_p_scaffold_80_curated_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2611..3516
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WUU6_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43186.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_80_curated_4
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3506..4930)
DNA (1425bp) protein (475aa)
D-lactate dehydrogenase (EC:1.1.2.4); K00102 D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D-lactate dehydrogenase (Cytochrome) n=2 Tax=Delftia RepID=F6AYV2_DELSC
Glycolate oxidase, subunit GlcD {ECO:0000313|EMBL:EZP52178.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
scnpilot_cont_500_p_scaffold_80_curated_5
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5012..5359)
DNA (348bp) protein (116aa)
Signal transduction protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AYV3_DELSC
signal transduction protein
Signal transduction protein {ECO:0000313|EMBL:AEF87109.1}; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
scnpilot_cont_500_p_scaffold_80_curated_6
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5539..6111
DNA (573bp) protein (191aa)
ATP/cobalamin adenosyltransferase (EC:2.5.1.17); K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17]
ATP--cobalamin adenosyltransferase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002F829FE
ATP--cobalamin adenosyltransferase {ECO:0000313|EMBL:KEH11041.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
scnpilot_cont_500_p_scaffold_80_curated_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6130..7035
DNA (906bp) protein (302aa)
Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQL2_DELAS
LysR family transcriptional regulator
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KFJ13687.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
scnpilot_cont_500_p_scaffold_80_curated_8
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7048..8277)
DNA (1230bp) protein (410aa)
D-amino-acid dehydrogenase {ECO:0000313|EMBL:EZP52174.1}; EC=1.4.99.1 {ECO:0000313|EMBL:EZP52174.1};; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
D-amino-acid dehydrogenase (EC:1.4.99.1); K00285 D-amino-acid dehydrogenase [EC:1.4.99.1]
D-amino-acid dehydrogenase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WUS7_DELAC
scnpilot_cont_500_p_scaffold_80_curated_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8500..9381
DNA (882bp) protein (294aa)
Polar amino acid transport system substrate-binding protein n=2 Tax=Delftia acidovorans RepID=S2WZ06_DELAC
Polar amino acid transport system substrate-binding protein {ECO:0000313|EMBL:EPD43180.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
ABC transporter substrate-binding protein; K02030 polar amino acid transport system substrate-binding protein
scnpilot_cont_500_p_scaffold_80_curated_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9396..10157
DNA (762bp) protein (254aa)
aspartate racemase; K01779 aspartate racemase [EC:5.1.1.13]
Aspartate racemase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQL6_DELAS
Aspartate racemase {ECO:0000313|EMBL:ABX32718.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_cont_500_p_scaffold_80_curated_11
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10151..11482)
DNA (1332bp) protein (444aa)
benzoyl-CoA oxygenase/reductase, BoxA protein (EC:1.18.1.2); K15511 benzoyl-CoA 2,3-dioxygenase component A [EC:1.14.12.21]
Benzoyl-CoA oxygenase/reductase, BoxA protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WTR4_DELAC
Benzoyl-CoA oxygenase {ECO:0000313|EMBL:KEH12905.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
scnpilot_cont_500_p_scaffold_80_curated_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11509..12936)
DNA (1428bp) protein (476aa)
benzoyl-CoA oxygenase subunit B; K15512 benzoyl-CoA 2,3-dioxygenase component B [EC:1.14.12.21]
Benzoyl-CoA oxygenase, B subunit {ECO:0000313|EMBL:KFJ13619.1}; EC=1.14.12.21 {ECO:0000313|EMBL:KFJ13619.1};; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
Benzoyl-CoA oxygenase component B n=2 Tax=Delftia RepID=A9BQL8_DELAS
scnpilot_cont_500_p_scaffold_80_curated_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12975..14645)
DNA (1671bp) protein (557aa)
benzoyl-CoA-dihydrodiol lyase; K15513 benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44]
crotonase n=1 Tax=Chryseobacterium taeanense RepID=UPI00037C7739
Benzoyl-CoA-dihydrodiol lyase {ECO:0000313|EMBL:ABX32721.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_cont_500_p_scaffold_80_curated_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14840..15754)
DNA (915bp) protein (305aa)
XRE family transcriptional regulator (EC:2.7.1.71); K15546 XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
Shikimate kinase n=3 Tax=Delftia RepID=F6AYW2_DELSC
scnpilot_cont_500_p_scaffold_80_curated_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15929..17521
DNA (1593bp) protein (531aa)
Benzoate--CoA ligase {ECO:0000313|EMBL:KFJ13590.1}; EC=6.2.1.25 {ECO:0000313|EMBL:KFJ13590.1};; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
benzoate-CoA ligase family protein; K04110 benzoate-CoA ligase [EC:6.2.1.25]
Benzoate-CoA ligase family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQM1_DELAS
scnpilot_cont_500_p_scaffold_80_curated_16
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17686..18849
DNA (1164bp) protein (388aa)
Extracellular ligand-binding receptor n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AYW4_DELSC
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
Branched-chain amino acid transport system substrate-binding protein {ECO:0000313|EMBL:EZP52166.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
scnpilot_cont_500_p_scaffold_80_curated_17
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18892..19764
DNA (873bp) protein (291aa)
ABC transporter permease n=1 Tax=Chryseobacterium taeanense RepID=UPI0002D2B40F
ABC transporter permease {ECO:0000313|EMBL:KEH11036.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
scnpilot_cont_500_p_scaffold_80_curated_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19768..20862
DNA (1095bp) protein (365aa)
Inner-membrane translocator n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQM4_DELAS
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
Inner-membrane translocator {ECO:0000313|EMBL:ABX32726.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_cont_500_p_scaffold_80_curated_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20855..21613
DNA (759bp) protein (253aa)
ABC transporter related n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQM5_DELAS
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ABX32727.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_cont_500_p_scaffold_80_curated_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21606..22319
DNA (714bp) protein (238aa)
Branched-chain amino acid transport system ATP-binding protein n=2 Tax=Bacteria RepID=S2WKN4_DELAC
Branched-chain amino acid transport system ATP-binding protein {ECO:0000313|EMBL:EPD40293.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
scnpilot_cont_500_p_scaffold_80_curated_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22320..22793)
DNA (474bp) protein (158aa)
Thioesterase superfamily protein n=3 Tax=Delftia RepID=A9BQM9_DELAS
phenylacetic acid degradation-like protein
Putative esterase {ECO:0000313|EMBL:KFJ13747.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
scnpilot_cont_500_p_scaffold_80_curated_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22924..24438)
DNA (1515bp) protein (505aa)
succinate CoA transferase (EC:3.1.2.1); K01067 acetyl-CoA hydrolase [EC:3.1.2.1]
Succinate CoA transferase n=3 Tax=Bacteria RepID=A9BQN0_DELAS
Acetyl-CoA hydrolase {ECO:0000313|EMBL:EPD40297.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_80_curated_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24646..25953)
DNA (1308bp) protein (436aa)
Uracil-xanthine permease n=2 Tax=Delftia RepID=A9BQN1_DELAS
uracil-xanthine permease
Uracil-xanthine permease {ECO:0000313|EMBL:ABX32733.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_cont_500_p_scaffold_80_curated_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26149..28212
DNA (2064bp) protein (688aa)
acetoacetyl-CoA synthetase; K01907 acetoacetyl-CoA synthetase [EC:6.2.1.16]
acetoacetyl-CoA synthetase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002ED482E
Acetoacetate-CoA ligase {ECO:0000313|EMBL:EPD43163.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
scnpilot_cont_500_p_scaffold_80_curated_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28301..29458
DNA (1158bp) protein (386aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQN3_DELAS
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ABX32735.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_cont_500_p_scaffold_80_curated_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29543..30559
DNA (1017bp) protein (339aa)
acyl-CoA dehydrogenase domain-containing protein; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3]
Acyl-CoA dehydrogenase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WLX8_DELAC
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EPD40301.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_80_curated_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30584..31372
DNA (789bp) protein (263aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WYY8_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43160.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
enoyl-CoA hydratase
scnpilot_cont_500_p_scaffold_80_curated_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31472..32287
DNA (816bp) protein (272aa)
Probable septum site-determining protein MinC n=2 Tax=Bacteria RepID=S2WKP0_DELAC
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
septum site-determining protein MinC; K03610 septum site-determining protein MinC
scnpilot_cont_500_p_scaffold_80_curated_29
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32337..33149
DNA (813bp) protein (271aa)
cell division inhibitor MinD n=1 Tax=Chryseobacterium taeanense RepID=UPI0002EEF383
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
septum site-determining protein MinD; K03609 septum site-determining protein MinD
scnpilot_cont_500_p_scaffold_80_curated_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33156..33419
DNA (264bp) protein (88aa)
Cell division topological specificity factor n=2 Tax=Delftia acidovorans RepID=S2WQD4_DELAC
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
cell division topological specificity factor MinE; K03608 cell division topological specificity factor
Displaying items 1-30 of 198 in total

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