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scnpilot_cont_500_p_scaffold_1669_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1669_curated_1
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(98..790)
DNA (693bp) protein (231aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2W9D3_DELAC
Uncharacterized protein {ECO:0000313|EMBL:KEH12661.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
YjbE family integral membrane protein
scnpilot_cont_500_p_scaffold_1669_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(956..1849)
DNA (894bp) protein (298aa)
succinyl-CoA synthetase subunit alpha (EC:6.2.1.5); K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
Succinyl-CoA ligase [ADP-forming] subunit alpha n=2 Tax=Delftia acidovorans RepID=S2W9V2_DELAC
scnpilot_cont_500_p_scaffold_1669_curated_3
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1870..3030)
DNA (1161bp) protein (387aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
succinyl-CoA synthetase subunit beta (EC:6.2.1.5); K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
Succinyl-CoA ligase [ADP-forming] subunit beta n=2 Tax=Delftia acidovorans RepID=S2WDK3_DELAC
scnpilot_cont_500_p_scaffold_1669_curated_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3466..4398
DNA (933bp) protein (311aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_01110, ECO:0000256|SAAS:SAAS00015955}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_01110};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_01110, ECO:0000256|SAAS:SAAS00015955};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01110}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WB29_DELAC
scnpilot_cont_500_p_scaffold_1669_curated_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4395..6278
DNA (1884bp) protein (628aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WU40_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD36267.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1669_curated_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6301..7221
DNA (921bp) protein (307aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2W9D6_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD36268.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1669_curated_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7218..7697)
DNA (480bp) protein (160aa)
Regulatory protein RecX n=2 Tax=Delftia acidovorans RepID=S2W9U7_DELAC
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
regulatory protein recX; K03565 regulatory protein
scnpilot_cont_500_p_scaffold_1669_curated_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7900..9003)
DNA (1104bp) protein (368aa)
recA protein (EC:3.6.3.8); K03553 recombination protein RecA
Protein RecA n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WDK7_DELAC
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_1669_curated_9
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9151..9651
DNA (501bp) protein (167aa)
MarR family transcriptional regulator n=1 Tax=Chryseobacterium taeanense RepID=UPI0002F01644
MarR family transcriptional regulator {ECO:0000313|EMBL:KEH08800.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
MarR family transcriptional regulator
scnpilot_cont_500_p_scaffold_1669_curated_10
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9752..10426
DNA (675bp) protein (225aa)
Two component transcriptional regulator, winged helix family n=4 Tax=Delftia RepID=A9BQB2_DELAS
winged helix family two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator
Transcriptional regulator {ECO:0000313|EMBL:KEH08799.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
scnpilot_cont_500_p_scaffold_1669_curated_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10522..12021
DNA (1500bp) protein (500aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
integral membrane sensor signal transduction histidine kinase; K07649 two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
Two-component system, OmpR family, sensor histidine kinase TctE n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W9E0_DELAC
scnpilot_cont_500_p_scaffold_1669_curated_12
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12005..12985)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2W9U3_DELAC
LysR family transcriptional regulator {ECO:0000313|EMBL:KEH08797.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_1669_curated_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13149..14063
DNA (915bp) protein (305aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WDL1_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD36275.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1669_curated_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14238..15170
DNA (933bp) protein (311aa)
N-formylglutamate amidohydrolase n=1 Tax=Chryseobacterium taeanense RepID=UPI00035E7CF3
Uncharacterized protein {ECO:0000313|EMBL:EPD36451.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
N-formylglutamate amidohydrolase
scnpilot_cont_500_p_scaffold_1669_curated_15
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15245..15979)
DNA (735bp) protein (245aa)
sporulation protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002E77515
Sporulation protein {ECO:0000313|EMBL:KEH10210.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
sporulation domain-containing protein
scnpilot_cont_500_p_scaffold_1669_curated_16
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16014..16844)
DNA (831bp) protein (277aa)
biotin-(acetyl-CoA carboxylase) ligase; K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
Biotin-[acetyl-CoA-carboxylase] ligase n=2 Tax=Delftia acidovorans RepID=S2W9E5_DELAC
Biotin--acetyl-CoA-carboxylase ligase {ECO:0000313|EMBL:KEH10211.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
scnpilot_cont_500_p_scaffold_1669_curated_17
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16841..17491)
DNA (651bp) protein (217aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2W9T7_DELAC
Lysine methyltransferase {ECO:0000313|EMBL:KEH08793.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
nuclear protein SET; K07117
scnpilot_cont_500_p_scaffold_1669_curated_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17620..20535
DNA (2916bp) protein (972aa)
DNA topoisomerase {ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|SAAS:SAAS00046608};; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
DNA topoisomerase III (EC:5.99.1.2); K03169 DNA topoisomerase III [EC:5.99.1.2]
DNA topoisomerase III n=2 Tax=Delftia acidovorans RepID=S2WDL7_DELAC
scnpilot_cont_500_p_scaffold_1669_curated_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20754..21533
DNA (780bp) protein (260aa)
protein tyrosine/serine phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
Protein-tyrosine phosphatase n=2 Tax=Bacteria RepID=S2WAP3_DELAC
Protein-tyrosine phosphatase {ECO:0000313|EMBL:EPD36281.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_1669_curated_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21617..21796
DNA (180bp) protein (60aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WE35_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD36282.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
Displaying 20 items

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