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scnpilot_cont_500_p_scaffold_252_curated

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Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_252_curated_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30..2138)
DNA (2109bp) protein (703aa)
Elongation factor G n=3 Tax=Bacteria RepID=S2X0K6_DELAC
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
elongation factor G; K02355 elongation factor G
scnpilot_cont_500_p_scaffold_252_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2291..2764)
DNA (474bp) protein (158aa)
30S ribosomal protein S7 n=2 Tax=Delftia acidovorans RepID=S2WFQ7_DELAC
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7
scnpilot_cont_500_p_scaffold_252_curated_3
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2925..3302)
DNA (378bp) protein (126aa)
30S ribosomal protein S12 n=8 Tax=cellular organisms RepID=RS12_ACIET
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
scnpilot_cont_500_p_scaffold_252_curated_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3460..4629)
DNA (1170bp) protein (390aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D-alanyl-D-alanine carboxypeptidase (Penicillin-binding protein 5/6) n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WKA6_DELAC
D-alanyl-D-alanine carboxypeptidase (Penicillin-binding protein 5/6) {ECO:0000313|EMBL:EPD38585.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
scnpilot_cont_500_p_scaffold_252_curated_5
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4720..5355)
DNA (636bp) protein (212aa)
alpha/beta hydrolase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002DA1F6A
Alpha/beta hydrolase {ECO:0000313|EMBL:KEH13053.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
putative transmembrane protein; K07018
scnpilot_cont_500_p_scaffold_252_curated_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5436..5810)
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2X0L0_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD38059.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
ferredoxin-like protein
scnpilot_cont_500_p_scaffold_252_curated_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5821..6975)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WFR3_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD38060.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
VanZ family protein
scnpilot_cont_500_p_scaffold_252_curated_8
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7007..7435)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XFT1_DELAC
Membrane protein {ECO:0000313|EMBL:KEH08491.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein; K08973 putative membrane protein
scnpilot_cont_500_p_scaffold_252_curated_9
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7559..8566
DNA (1008bp) protein (336aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
delta-aminolevulinic acid dehydratase (EC:4.2.1.24); K01698 porphobilinogen synthase [EC:4.2.1.24]
delta-aminolevulinic acid dehydratase n=1 Tax=Chryseobacterium taeanense RepID=UPI00031CDFE0
scnpilot_cont_500_p_scaffold_252_curated_10
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8571..9788
DNA (1218bp) protein (406aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=S2WH16_DELAC
Magnesium transporter CorA {ECO:0000313|EMBL:KEH13058.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
Mg2 transporter protein CorA family protein
scnpilot_cont_500_p_scaffold_252_curated_11
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9785..11629)
DNA (1845bp) protein (615aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X0L6_DELAC
Histidine kinase {ECO:0000313|EMBL:KEH13059.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
putative signal transduction histidine kinase
scnpilot_cont_500_p_scaffold_252_curated_12
unknown

Not on your lists

11784..12479
DNA (696bp) protein (232aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_252_curated_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12621..15242
DNA (2622bp) protein (874aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WFK1_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD38066.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_252_curated_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15239..15883
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WZ61_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD38067.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_252_curated_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16178..16492
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0003817FF2
Uncharacterized protein {ECO:0000313|EMBL:EPD38596.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_252_curated_16
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16526..16894)
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AM06_DELSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEH08487.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
scnpilot_cont_500_p_scaffold_252_curated_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16891..17181)
DNA (291bp) protein (97aa)
DNA polymerase beta domain protein region n=2 Tax=Bacteria RepID=F6AM05_DELSC
DNA polymerase beta domain-containing protein; K07075
Nucleotidyltransferase domain protein {ECO:0000313|EMBL:KFJ13478.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
scnpilot_cont_500_p_scaffold_252_curated_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17304..17996)
DNA (693bp) protein (231aa)
carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45]
Carboxymethylenebutenolidase n=2 Tax=Delftia acidovorans RepID=S2X0M1_DELAC
Carboxymethylenebutenolidase {ECO:0000313|EMBL:EPD38069.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_252_curated_19
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18115..18867
DNA (753bp) protein (251aa)
Sugar dehydrogenase {ECO:0000313|EMBL:KEH13064.1}; EC=1.1.1.47 {ECO:0000313|EMBL:KEH13064.1};; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WFS3_DELAC
short-chain dehydrogenase/reductase SDR
scnpilot_cont_500_p_scaffold_252_curated_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18881..19528
DNA (648bp) protein (216aa)
MarC family membrane protein n=2 Tax=Delftia acidovorans RepID=S2WFK8_DELAC
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
multiple antibiotic resistance (MarC)-like protein; K05595 multiple antibiotic resistance protein
scnpilot_cont_500_p_scaffold_252_curated_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19562..20062)
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WKB9_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD38072.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hemerythrin-like metal-binding protein
scnpilot_cont_500_p_scaffold_252_curated_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20317..20904)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WH25_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD38601.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_252_curated_23
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21050..21268)
DNA (219bp) protein (73aa)
CsbD family protein n=4 Tax=Delftia RepID=A9BPP6_DELAS
CsbD family protein
General stress protein CsbD {ECO:0000313|EMBL:KEH08482.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
scnpilot_cont_500_p_scaffold_252_curated_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21792..22460)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WFS8_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD38603.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_252_curated_25
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22474..23436)
DNA (963bp) protein (321aa)
ABC transporter substrate-binding protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WFL3_DELAC
Mammalian cell entry protein {ECO:0000313|EMBL:KEH13069.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
mammalian cell entry domain-containing protein; K02067 putative ABC transport system substrate-binding protein
scnpilot_cont_500_p_scaffold_252_curated_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23635..24438)
DNA (804bp) protein (268aa)
ABC transporter related n=3 Tax=Delftia RepID=A9BPP3_DELAS
ABC transporter-like protein; K02065 putative ABC transport system ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ABX33012.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_cont_500_p_scaffold_252_curated_27
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24438..25568)
DNA (1131bp) protein (377aa)
ABC transporter permease n=2 Tax=Delftia acidovorans RepID=S2WE93_DELAC
ABC transporter permease {ECO:0000313|EMBL:KEH13071.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein; K02066 putative ABC transport system permease protein
scnpilot_cont_500_p_scaffold_252_curated_28
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25895..27622
DNA (1728bp) protein (576aa)
glucose-methanol-choline oxidoreductase; K00108 choline dehydrogenase [EC:1.1.99.1]
choline dehydrogenase n=1 Tax=Chryseobacterium taeanense RepID=UPI00031AB6B8
Choline dehydrogenase {ECO:0000313|EMBL:KEH08479.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
scnpilot_cont_500_p_scaffold_252_curated_29
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27619..28542)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WFT5_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD38608.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_252_curated_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28642..29670
DNA (1029bp) protein (343aa)
Uncharacterized protein n=3 Tax=Bacteria RepID=S2WFL8_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD38081.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
alcohol dehydrogenase
Displaying items 1-30 of 102 in total

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