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scnpilot_cont_500_p_scaffold_156_curated

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_156_curated_1
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148..501
DNA (354bp) protein (118aa)
Peptidoglycan-binding LysM n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TQ57_ACIAC
LysM domain protein {ECO:0000313|EMBL:EZP54438.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
peptidoglycan-binding LysM
scnpilot_cont_500_p_scaffold_156_curated_2
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(379..1140)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X2V8_DELAC
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EZP54437.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
enoyl-CoA hydratase/isomerase
scnpilot_cont_500_p_scaffold_156_curated_3
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1137..2324)
DNA (1188bp) protein (396aa)
formyl-CoA transferase (EC:2.8.3.16); K07749 formyl-CoA transferase [EC:2.8.3.16]
PREDICTED: succinate--hydroxymethylglutarate CoA-transferase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C196A7
CoA-transferase {ECO:0000313|EMBL:KEH07636.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
scnpilot_cont_500_p_scaffold_156_curated_4
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2334..3317)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XIC5_DELAC
LacI family transcriptional regulator {ECO:0000313|EMBL:KEH07635.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_156_curated_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3428..4330)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XTS0_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD42924.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_156_curated_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4418..5056)
DNA (639bp) protein (213aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase (EC:4.1.2.14); K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=2 Tax=Delftia acidovorans RepID=S2WJ79_DELAC
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:EPD42923.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_156_curated_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5041..6867)
DNA (1827bp) protein (609aa)
6-phosphogluconate dehydratase (EC:4.2.1.12); K01690 phosphogluconate dehydratase [EC:4.2.1.12]
Phosphogluconate dehydratase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X2W3_DELAC
Phosphogluconate dehydratase {ECO:0000313|EMBL:EPD39372.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
scnpilot_cont_500_p_scaffold_156_curated_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6977..7996)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=S2WI05_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD39373.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
TRAP dicarboxylate transporter subunit DctP
scnpilot_cont_500_p_scaffold_156_curated_9
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8025..9305)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WY50_DELAC
L-dehydroascorbate transporter large permease subunit {ECO:0000313|EMBL:KEH12182.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
TRAP dicarboxylate transporter subunit DctM
scnpilot_cont_500_p_scaffold_156_curated_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9318..9824)
DNA (507bp) protein (169aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WMJ7_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD42919.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
tripartite AtP-independent periplasmic transporter subunit DctQ
scnpilot_cont_500_p_scaffold_156_curated_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9843..10361)
DNA (519bp) protein (173aa)
thermoresistant glucokinase family carbohydrate kinase (EC:2.7.1.12); K00851 gluconokinase [EC:2.7.1.12]
Gluconokinase n=2 Tax=Delftia acidovorans RepID=S2WJ84_DELAC
Gluconokinase {ECO:0000313|EMBL:EPD42918.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_156_curated_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10587..11681
DNA (1095bp) protein (365aa)
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor n=2 Tax=Bacteria RepID=S2XC84_DELAC
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor {ECO:0000313|EMBL:EPD42917.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
LacI family transcriptional regulator; K06145 LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
scnpilot_cont_500_p_scaffold_156_curated_13
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11765..13813)
DNA (2049bp) protein (683aa)
acetyl-CoA carboxylase, biotin carboxylase (EC:6.4.1.3); K01965 propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
Acetyl-CoA carboxylase, biotin carboxylase subunit n=2 Tax=Delftia acidovorans RepID=S2WI10_DELAC
Acetyl-CoA carboxylase {ECO:0000313|EMBL:KEH07631.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
scnpilot_cont_500_p_scaffold_156_curated_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13862..15394)
DNA (1533bp) protein (511aa)
carboxyl transferase; K01966 propionyl-CoA carboxylase beta chain [EC:6.4.1.3]
Propionyl-CoA carboxylase beta chain n=2 Tax=Delftia acidovorans RepID=S2WY46_DELAC
Propionyl-CoA carboxylase beta chain {ECO:0000313|EMBL:EPD42915.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_156_curated_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15452..16462)
DNA (1011bp) protein (337aa)
arginine/ornithine transport system ATPase; K07588 LAO/AO transport system kinase [EC:2.7.-.-]
LAO/AO transport system ATPase n=2 Tax=Delftia acidovorans RepID=S2WMK2_DELAC
LAO/AO transport system ATPase {ECO:0000313|EMBL:EPD42914.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_156_curated_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16488..18665)
DNA (2178bp) protein (726aa)
methylmalonyl-CoA mutase (EC:5.4.99.2); K01847 methylmalonyl-CoA mutase [EC:5.4.99.2]
Methylmalonyl-CoA mutase, small subunit n=3 Tax=cellular organisms RepID=S2WJ88_DELAC
Methylmalonyl-CoA mutase, small subunit {ECO:0000313|EMBL:EPD42913.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_156_curated_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18780..19415
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2X2X0_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD42912.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
GntR family transcriptional regulator
scnpilot_cont_500_p_scaffold_156_curated_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19631..21574
DNA (1944bp) protein (648aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3); K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
Long-chain acyl-CoA synthetase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WU07_DELAC
Long-chain acyl-CoA synthetase {ECO:0000313|EMBL:EPD42911.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_156_curated_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21713..23314)
DNA (1602bp) protein (534aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=S2WY41_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD42910.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
methyl-accepting chemotaxis sensory transducer
scnpilot_cont_500_p_scaffold_156_curated_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23599..23943)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XTQ8_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD42909.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_156_curated_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24007..24303)
DNA (297bp) protein (99aa)
Branched-chain amino acid transport n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C2N1_DELAS
branched-chain amino acid transport
Branched-chain amino acid transport {ECO:0000313|EMBL:ABX36380.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_cont_500_p_scaffold_156_curated_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24307..24948)
DNA (642bp) protein (214aa)
AzlC family protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ASA7_DELSC
AzlC family protein {ECO:0000313|EMBL:KFJ11553.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
AzlC family protein
scnpilot_cont_500_p_scaffold_156_curated_23
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25354..25668
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002F5432B
Uncharacterized protein {ECO:0000313|EMBL:KEH12172.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_156_curated_24
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25737..26207
DNA (471bp) protein (157aa)
Appr-1-p processing domain protein n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SJC1_PLABD
Appr-1-p processing protein {ECO:0000313|EMBL:KEH06849.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
Appr-1-p processing protein
scnpilot_cont_500_p_scaffold_156_curated_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26057..26641)
DNA (585bp) protein (195aa)
YD repeat protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C2K3_DELAS
YD repeat-containing protein
YD repeat protein {ECO:0000313|EMBL:ABX36352.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_cont_500_p_scaffold_156_curated_26
unknown

Not on your lists

28784..28888
DNA (105bp) protein (35aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_156_curated_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28972..29823)
DNA (852bp) protein (284aa)
Rhs family protein-like protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C2K7_DELAS
Rhs family protein-like protein
Rhs family protein-like protein {ECO:0000313|EMBL:ABX36356.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_cont_500_p_scaffold_156_curated_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30431..32527)
DNA (2097bp) protein (699aa)
YD repeat protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C2K3_DELAS
YD repeat protein {ECO:0000313|EMBL:ABX36352.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
YD repeat-containing protein
scnpilot_cont_500_p_scaffold_156_curated_29
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35262..35798
DNA (537bp) protein (179aa)
Transcriptional regulator, MarR family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C2M8_DELAS
MarR family transcriptional regulator {ECO:0000313|EMBL:KEH07620.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
MarR family transcriptional regulator
scnpilot_cont_500_p_scaffold_156_curated_30
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35869..37344
DNA (1476bp) protein (492aa)
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C2M7_DELAS
RND transporter {ECO:0000313|EMBL:KEH07619.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
RND efflux system outer membrane lipoprotein
Displaying items 1-30 of 72 in total

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