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scnpilot_cont_500_p_scaffold_1781_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1781_curated_1
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..396
DNA (396bp) protein (132aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
Peptide methionine sulfoxide reductase MsrA n=2 Tax=Delftia acidovorans RepID=S2WMQ1_DELAC
scnpilot_cont_500_p_scaffold_1781_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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551..1006
DNA (456bp) protein (152aa)
Fur family transcriptional regulator, ferric uptake regulator n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WZN5_DELAC
Fur family transcriptional regulator, ferric uptake regulator {ECO:0000313|EMBL:EPD45238.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
ferric uptake regulator family protein; K03711 Fur family transcriptional regulator, ferric uptake regulator
scnpilot_cont_500_p_scaffold_1781_curated_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1055..1375
DNA (321bp) protein (107aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2XLY1_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD40584.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1781_curated_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1498..1953
DNA (456bp) protein (152aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WLF4_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD40583.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1781_curated_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2058..4388
DNA (2331bp) protein (777aa)
Iron complex outermembrane recepter protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X5Z5_DELAC
Iron complex outermembrane recepter protein {ECO:0000313|EMBL:EPD40582.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
scnpilot_cont_500_p_scaffold_1781_curated_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4424..5485)
DNA (1062bp) protein (354aa)
integrase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002FA8474
Uncharacterized protein {ECO:0000313|EMBL:EPD45242.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
integrase family protein
scnpilot_cont_500_p_scaffold_1781_curated_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5762..6715
DNA (954bp) protein (318aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WR76_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD40580.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
auxin efflux carrier; K07088
scnpilot_cont_500_p_scaffold_1781_curated_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6747..7403)
DNA (657bp) protein (219aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
pyridoxine/pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5); K00275 pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=2 Tax=Bacteria RepID=S2Y0H0_DELAC
scnpilot_cont_500_p_scaffold_1781_curated_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7447..8019
DNA (573bp) protein (191aa)
hypothetical protein; K07141 molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
Molybdenum cofactor cytidylyltransferase n=2 Tax=Delftia acidovorans RepID=S2WLF1_DELAC
Molybdenum cofactor cytidylyltransferase {ECO:0000313|EMBL:EPD40578.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_1781_curated_10
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8022..8588)
DNA (567bp) protein (189aa)
Regulatory protein MarR n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6APH4_DELSC
regulatory protein MarR
Regulatory protein MarR {ECO:0000313|EMBL:AEF89880.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
scnpilot_cont_500_p_scaffold_1781_curated_11
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8832..9647
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WMP0_DELAC
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEH09079.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
extra-cytoplasmic solute receptor
scnpilot_cont_500_p_scaffold_1781_curated_12
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9674..9814
DNA (141bp) protein (47aa)
Extra-cytoplasmic solute receptor n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6APH5_DELSC
extra-cytoplasmic solute receptor
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEH09079.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
scnpilot_cont_500_p_scaffold_1781_curated_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9816..12110
DNA (2295bp) protein (765aa)
xanthine dehydrogenase (EC:1.17.1.4)
Uncharacterized protein n=2 Tax=cellular organisms RepID=S2WR70_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD40575.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_1781_curated_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12103..12999
DNA (897bp) protein (299aa)
carbon-monoxide dehydrogenase (EC:1.2.99.2); K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2]
Carbon-monoxide dehydrogenase medium subunit n=2 Tax=Delftia acidovorans RepID=S2XLW8_DELAC
Carbon-monoxide dehydrogenase medium subunit {ECO:0000313|EMBL:EPD40574.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_1781_curated_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12996..13502
DNA (507bp) protein (169aa)
carbon-monoxide dehydrogenase (EC:1.2.99.2); K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
Carbon-monoxide dehydrogenase small subunit n=2 Tax=Delftia acidovorans RepID=S2WLE7_DELAC
Carbon-monoxide dehydrogenase small subunit {ECO:0000313|EMBL:EPD40573.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_1781_curated_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13492..14268
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X0J3_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD45251.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
carbon monoxide dehydrogenase subunit G
scnpilot_cont_500_p_scaffold_1781_curated_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14290..14901)
DNA (612bp) protein (204aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
superoxide dismutase copper/zinc binding protein; K04565 Cu/Zn superoxide dismutase [EC:1.15.1.1]
Superoxide dismutase [Cu-Zn] n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WMN4_DELAC
scnpilot_cont_500_p_scaffold_1781_curated_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15052..15627)
DNA (576bp) protein (192aa)
Cation transporter ChaC n=2 Tax=Delftia acidovorans RepID=S2WR65_DELAC
Cation transporter ChaC {ECO:0000313|EMBL:EPD40570.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
ChaC family protein; K07232 cation transport protein ChaC
scnpilot_cont_500_p_scaffold_1781_curated_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15914..16438
DNA (525bp) protein (175aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2XLW1_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD40569.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
OmpA/MotB domain-containing protein
Displaying 19 items

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