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scnpilot_cont_500_p_scaffold_759_curated

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_759_curated_1
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..98
DNA (96bp) protein (32aa)
Substrate-binding region of ABC-type glycine betaine transport system n=2 Tax=Delftia RepID=A9C1W9_DELAS
proX; glycine betaine transporter periplasmic subunit; K02002 glycine betaine/proline transport system substrate-binding protein
Glycine betaine/proline transport system substrate-binding protein {ECO:0000313|EMBL:EZP63044.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
scnpilot_cont_500_p_scaffold_759_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143..1897)
DNA (1755bp) protein (585aa)
PTS system fructose subfamily transporter subunit IIC; K02769 PTS system, fructose-specific IIB component [EC:2.7.1.69]; K02770 PTS system, fructose-specific IIC component
PTS system, fructose-specific IIC component n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X779_DELAC
PTS system, fructose-specific IIC component {ECO:0000313|EMBL:EPD41032.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
scnpilot_cont_500_p_scaffold_759_curated_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1921..2886)
DNA (966bp) protein (322aa)
1-phosphofructokinase (EC:2.7.1.56); K00882 1-phosphofructokinase [EC:2.7.1.56]
Phosphofructokinase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1W7_DELAS
Phosphofructokinase {ECO:0000256|PIRNR:PIRNR000535}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_cont_500_p_scaffold_759_curated_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2883..5426)
DNA (2544bp) protein (848aa)
phosphoenolpyruvate-protein phosphotransferase (EC:2.7.3.9); K02768 PTS system, fructose-specific IIA component [EC:2.7.1.69]; K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9]; K11183 phosphocarrier protein FPr
PTS fructose transporter subunit IIA n=1 Tax=Chryseobacterium taeanense RepID=UPI0003691967
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000313|EMBL:EPD41034.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
scnpilot_cont_500_p_scaffold_759_curated_5
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5562..6548
DNA (987bp) protein (329aa)
LacI family transcriptional regulator (EC:5.1.1.1); K03435 LacI family transcriptional regulator, fructose operon transcriptional repressor
LacI family transcription regulator n=1 Tax=Chryseobacterium taeanense RepID=UPI0002DF4397
LacI family transcriptional regulator {ECO:0000313|EMBL:KEH15025.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
scnpilot_cont_500_p_scaffold_759_curated_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6677..7363
DNA (687bp) protein (229aa)
Chemotaxis protein CheX n=2 Tax=Delftia acidovorans RepID=S2WP09_DELAC
Chemotaxis protein CheX {ECO:0000313|EMBL:EPD44626.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_759_curated_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7480..7989
DNA (510bp) protein (170aa)
MarR family transcriptional regulator, transcriptional regulator for hemolysin n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X784_DELAC
MarR family transcriptional regulator, transcriptional regulator for hemolysin {ECO:0000313|EMBL:EPD41037.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
MarR family transcriptional regulator; K06075 MarR family transcriptional regulator, transcriptional regulator for hemolysin
scnpilot_cont_500_p_scaffold_759_curated_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7991..9217
DNA (1227bp) protein (409aa)
MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WMR9_DELAC
MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein {ECO:0000313|EMBL:EPD41038.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
Bcr/CflA subfamily drug resistance transporter; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein
scnpilot_cont_500_p_scaffold_759_curated_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9332..10231
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XNF1_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD41039.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_759_curated_10
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10296..11687)
DNA (1392bp) protein (464aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
class II fumarate hydratase (EC:4.2.1.2); K01679 fumarate hydratase, class II [EC:4.2.1.2]
Fumarate hydratase class II n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XHB5_DELAC
scnpilot_cont_500_p_scaffold_759_curated_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12001..13554
DNA (1554bp) protein (518aa)
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha (EC:4.2.1.2); K01676 fumarate hydratase, class I [EC:4.2.1.2]
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit n=3 Tax=Delftia RepID=F6AWD6_DELSC
Fumarate hydratase, class I {ECO:0000313|EMBL:EPD41041.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
scnpilot_cont_500_p_scaffold_759_curated_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13655..14287
DNA (633bp) protein (211aa)
type 11 methyltransferase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002F56217
Uncharacterized protein {ECO:0000313|EMBL:EPD44620.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
type 11 methyltransferase
scnpilot_cont_500_p_scaffold_759_curated_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14284..14871
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WMS4_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD41043.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
N-acetyltransferase GCN5
scnpilot_cont_500_p_scaffold_759_curated_14
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14930..15820
DNA (891bp) protein (297aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
glutamate racemase (EC:5.1.1.3); K01776 glutamate racemase [EC:5.1.1.3]
Glutamate racemase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XNG0_DELAC
scnpilot_cont_500_p_scaffold_759_curated_15
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15822..16433)
DNA (612bp) protein (204aa)
metal-dependent hydrolase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002EBFC6B
Metal-dependent hydrolase {ECO:0000313|EMBL:KEH10810.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein; K07043
scnpilot_cont_500_p_scaffold_759_curated_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16466..17167)
DNA (702bp) protein (234aa)
Uncharacterized protein n=3 Tax=Delftia RepID=S2WP22_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD44616.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_759_curated_17
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17826..18590)
DNA (765bp) protein (255aa)
peptidase M48 Ste24p; K07387 putative metalloprotease [EC:3.4.24.-]
Uncharacterized protein n=3 Tax=Bacteria RepID=S2W9H3_DELAC
Peptidase M48 Ste24p {ECO:0000313|EMBL:EZP50319.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
scnpilot_cont_500_p_scaffold_759_curated_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19351..19869
DNA (519bp) protein (173aa)
transposase n=1 Tax=Comamonas sp. B-9 RepID=UPI0003957E0F
transposase
Putative transposase {ECO:0000313|EMBL:AFU44949.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_cont_500_p_scaffold_759_curated_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19878..20708
DNA (831bp) protein (277aa)
integrase n=1 Tax=Comamonas sp. B-9 RepID=UPI000395A5AC
integrase catalytic subunit
Integrase catalytic subunit {ECO:0000313|EMBL:AFU44948.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_cont_500_p_scaffold_759_curated_20
Xanthomonas oryzae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20787..21110
DNA (324bp) protein (108aa)
Insertion element IS401 uncharacterized 12,4 kDa protein n=2 Tax=Xanthomonas campestris pv. translucens RepID=L0T317_XANCT
Transposase {ECO:0000313|EMBL:AJQ87699.1}; TaxID=129394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas oryzae pv. oryzicola.;"
transposase IS3/IS911 family protein
scnpilot_cont_500_p_scaffold_759_curated_21
Xanthomonas oryzae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21107..22012
DNA (906bp) protein (302aa)
Transposase for insertion sequence element n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZH77_XANCT
Transposase {ECO:0000313|EMBL:AJQ87401.1}; TaxID=129394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas oryzae pv. oryzicola.;"
integrase catalytic subunit
scnpilot_cont_500_p_scaffold_759_curated_22
Pseudomonas mosselii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22258..22758)
DNA (501bp) protein (167aa)
Uncharacterized protein n=46 Tax=Proteobacteria RepID=A1W5L7_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIN57428.1}; TaxID=1388763 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mosselii SJ10.;"
scnpilot_cont_500_p_scaffold_759_curated_23
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23209..23955
DNA (747bp) protein (249aa)
Uncharacterized protein n=10 Tax=Proteobacteria RepID=A1W5L6_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETU97050.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
scnpilot_cont_500_p_scaffold_759_curated_24
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24074..24286
DNA (213bp) protein (71aa)
Phage transcriptional regulator, AlpA n=59 Tax=Proteobacteria RepID=A1W5L5_ACISJ
phage-like protein
Prophage CP4-57 regulatory family protein {ECO:0000313|EMBL:AIO46983.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
scnpilot_cont_500_p_scaffold_759_curated_25
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24329..25204
DNA (876bp) protein (292aa)
Cobyrinic acid a,c-diamide synthase n=11 Tax=Proteobacteria RepID=A1W5L4_ACISJ
Uncharacterized protein {ECO:0000313|EMBL:CEH75200.1}; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. citri.;"
cobyrinic acid a,c-diamide synthase
scnpilot_cont_500_p_scaffold_759_curated_26
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25188..25457
DNA (270bp) protein (90aa)
Uncharacterized protein n=48 Tax=Proteobacteria RepID=A1W5L3_ACISJ
Uncharacterized protein {ECO:0000313|EMBL:CEH75197.1}; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. citri.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_759_curated_27
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25450..27129
DNA (1680bp) protein (560aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=J7DDA5_PSEAI
Putative transcriptional regulator {ECO:0000313|EMBL:CEH75194.1}; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. citri.;"
transcriptional regulator
scnpilot_cont_500_p_scaffold_759_curated_28
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27144..27704
DNA (561bp) protein (187aa)
COG0635: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases n=50 Tax=Proteobacteria RepID=B7V579_PSEA8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJO29616.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii HLE.;"
scnpilot_cont_500_p_scaffold_759_curated_29
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27708..28940
DNA (1233bp) protein (411aa)
Uncharacterized protein n=3 Tax=Pseudomonas aeruginosa RepID=U8EGM1_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:ETU97044.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_759_curated_30
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29370..30164
DNA (795bp) protein (265aa)
Integrating conjugative element protein n=3 Tax=Pseudomonas aeruginosa RepID=U8EHZ4_PSEAI
transposon
Integrating conjugative element protein {ECO:0000313|EMBL:ETU97043.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
Displaying items 1-30 of 32 in total

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