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scnpilot_cont_500_p_scaffold_146_curated

Search features with annotation key words

Displaying items 1-30 of 128 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_146_curated_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58..408
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW21_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX35837.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_cont_500_p_scaffold_146_curated_2
unknown

Not on your lists

405..653
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_146_curated_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

650..970
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2W815_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD35848.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_146_curated_4
unknown

Not on your lists

916..1395
DNA (480bp) protein (160aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_146_curated_5
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1392..1913
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI000302F80F
Uncharacterized protein {ECO:0000313|EMBL:KEH14651.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_146_curated_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1980..2990
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002FB70F1
Uncharacterized protein {ECO:0000313|EMBL:EPD35854.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
gp37gp68 family protein
scnpilot_cont_500_p_scaffold_146_curated_7
unknown

Not on your lists

2987..3190
DNA (204bp) protein (68aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_146_curated_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3518..4294
DNA (777bp) protein (259aa)
exodeoxyribonuclease III Xth (EC:3.1.11.2); K01142 exodeoxyribonuclease III [EC:3.1.11.2]
Exodeoxyribonuclease III n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WP13_DELAC
Exodeoxyribonuclease III {ECO:0000313|EMBL:EPD39875.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_146_curated_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4310..5164)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XNJ9_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD46772.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_146_curated_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5266..6834)
DNA (1569bp) protein (523aa)
Nitrogen regulation protein NR(I) n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X518_DELAC
Nitrogen regulation protein NR(I) {ECO:0000313|EMBL:EPD46771.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
nitrogen metabolism transcriptional regulator NtrC; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG
scnpilot_cont_500_p_scaffold_146_curated_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6880..7956)
DNA (1077bp) protein (359aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
signal transduction histidine kinase NtrB; K07708 two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL n=2 Tax=Delftia acidovorans RepID=S2WJG8_DELAC
scnpilot_cont_500_p_scaffold_146_curated_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7987..8490)
DNA (504bp) protein (168aa)
signal peptide protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002EDE4C5
Uncharacterized protein {ECO:0000313|EMBL:EPD46769.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_146_curated_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8671..10086)
DNA (1416bp) protein (472aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
type I glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2]
Glutamine synthetase n=2 Tax=Delftia acidovorans RepID=S2WP18_DELAC
scnpilot_cont_500_p_scaffold_146_curated_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10312..11130)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WKN9_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD39881.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
molybdopterin binding domain-containing protein
scnpilot_cont_500_p_scaffold_146_curated_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11127..12026)
DNA (900bp) protein (300aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2X467_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD39882.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_146_curated_16
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12042..13022)
DNA (981bp) protein (327aa)
Fatty acid hydroxylase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AN83_DELSC
fatty acid hydroxylase
Fatty acid hydroxylase {ECO:0000313|EMBL:AEF88642.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
scnpilot_cont_500_p_scaffold_146_curated_17
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13062..13880)
DNA (819bp) protein (273aa)
peptidase A8 n=1 Tax=Chryseobacterium taeanense RepID=UPI0002E9A0C9
Peptidase A8 {ECO:0000313|EMBL:KEH14070.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
polysaccharide deacetylase
scnpilot_cont_500_p_scaffold_146_curated_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13880..15052)
DNA (1173bp) protein (391aa)
40-residue YVTN family beta-propeller repeat protein n=2 Tax=Delftia RepID=A9BMU1_DELAS
hypothetical protein
40-residue YVTN family beta-propeller repeat protein {ECO:0000313|EMBL:ABX37636.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_cont_500_p_scaffold_146_curated_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15304..15828)
DNA (525bp) protein (175aa)
Phosphoribosyltransferase n=4 Tax=Delftia RepID=A9BMU2_DELAS
phosphoribosyltransferase; K07101
Phosphoribosyl transferase domain protein {ECO:0000313|EMBL:KFJ12150.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
scnpilot_cont_500_p_scaffold_146_curated_20
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15872..17248)
DNA (1377bp) protein (459aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4]
Adenylosuccinate synthetase n=2 Tax=Delftia RepID=PURA_DELAS rbh
scnpilot_cont_500_p_scaffold_146_curated_21
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17288..18436)
DNA (1149bp) protein (383aa)
ATP phosphoribosyltransferase regulatory subunit n=2 Tax=Delftia acidovorans RepID=S2WJI0_DELAC
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
tRNA synthetase class II (G H P and S); K02502 ATP phosphoribosyltransferase regulatory subunit
scnpilot_cont_500_p_scaffold_146_curated_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18638..19528)
DNA (891bp) protein (297aa)
HflC protein; K04087 membrane protease subunit HflC [EC:3.4.-.-]
Protein HflC n=3 Tax=cellular organisms RepID=S2XJR2_DELAC
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_146_curated_23
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19541..20935)
DNA (1395bp) protein (465aa)
HflK protein; K04088 membrane protease subunit HflK [EC:3.4.-.-]
HflK protein n=3 Tax=Bacteria RepID=S2WP28_DELAC
Membrane protein {ECO:0000313|EMBL:KEH14075.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
scnpilot_cont_500_p_scaffold_146_curated_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21007..22221)
DNA (1215bp) protein (405aa)
GTPase HflX n=2 Tax=Delftia acidovorans RepID=S2WKQ3_DELAC
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
GTP-binding proten HflX; K03665 GTP-binding protein HflX
scnpilot_cont_500_p_scaffold_146_curated_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22289..22540)
DNA (252bp) protein (84aa)
RNA-binding protein Hfq n=4 Tax=Delftia RepID=HFQ_DELAS
protein hfq; K03666 host factor-I protein
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_146_curated_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22643..23989)
DNA (1347bp) protein (449aa)
GTPase Der n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WJI6_DELAC
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
engA; GTP-binding protein EngA; K03977 GTP-binding protein
scnpilot_cont_500_p_scaffold_146_curated_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24005..25162)
DNA (1158bp) protein (386aa)
Outer membrane protein assembly factor BamB n=2 Tax=Delftia acidovorans RepID=S2XJR4_DELAC
Outer membrane protein assembly factor BamB {ECO:0000256|HAMAP-Rule:MF_00923}; Flags: Precursor;; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
outer membrane assembly lipoprotein YfgL
scnpilot_cont_500_p_scaffold_146_curated_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25183..25866)
DNA (684bp) protein (228aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WP33_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD39895.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_146_curated_29
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(25937..27322)
DNA (1386bp) protein (462aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21]
Histidine--tRNA ligase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WKQ7_DELAC
scnpilot_cont_500_p_scaffold_146_curated_30
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27381..28664)
DNA (1284bp) protein (428aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1]
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X501_DELAC
Displaying items 1-30 of 128 in total

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