ggKbase home page

scnpilot_cont_500_p_scaffold_394_curated_21

Organism: scnpilot_dereplicated_Delftia_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(35319..39431)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2679
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 999.99
  • Bit_score: 2665
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W5G5_DELAC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2679
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Delftia acidovorans → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4113
ATGGCCTATTCTTACACCGAACGCAAGCGAATCCGCAAAAGCTTCGGGAGCCGCGACAGCGTGCTCGAAGTGCCTTACCTGCTGCAGATGCAAAAAGATGCATATACCGCATTCTTGCAGGCAGATGTAGCCCCCAAAAAACGCACCATCGAAGGCCTGCAAGCGGCCTTCAACTCTGCCTTCCCCATCGTCTCCCACAACGGTTTTGTGGAGATGAAGTTCGTCGAGTACAACCTCGCCAAGCCTGCTTTCGATGTGCGCGAGTGCCAGACCCGTGGTCTGACCTTCGCCTCTGCCGTGCGCGCCAAGGTTCAGCTGATCATCTATGACCGTGAGTCTTCGACCTCGCAGTCCAAGGTGGTCAAGGAAGTCAAGGAGCAAGAGGTCTACATGGGCGAAGTGCCCCTGATGACCGACAAGGGCTCGTTCATCATCAACGGTACCGAGCGCGTCATCGTCTCGCAGCTGCACCGCTCGCCTGGCGTGTTCTTCGAACACGACAAGGGCAAGACCCACAGCTCGGGCAAGCTGCTGTTCTCGGCACGCATCATTCCTTACCGCGGCTCGTGGCTGGACTTCGAGTTCGACCCCAAGGACCTGCTGTTCTTCCGCGTCGACCGTCGTCGCAAGATGCCCGTGTCCATTCTGCTGAAGGCCATCGGCCTGACGCCGGAATCGATCCTGGCCAATTTCTTCGTCAACGACAACTTCCGCCTCATGGATTCGGGCGCGCAGATGGAGTTCGTCCCCGAGCGCCTGCGCGGCGAGGTCGCGCGCTTCGACATCACCGACAAGTCGGGCAAGGTCGTGGTCGCCAAGGACAAGCGCGTCACTGCTCGCCACACGCGTGAGCTGGAGCAGTCGGGCACCAAGTTCATCAGCGTCCCCGAAGATTTCCTGATCGGCCGCGTGGTCGCCAAGAACATCGTCGATCCGGACACTGGCGAGATCATCGCCAAGGCCAACGAAGAGCTGACCGAGTCCCTGCTCAAGAAGCTGCGCAGCGCCGGCATCCAGGATCTGCAGTGCATCTACACGAACGAGCTGGACCAGGGCGCCTACATTTCGCAGACCCTGCGCACCGACGAAACCGTCGATGAGTTCGCTGCGCGCGTGGCCATCTACCGCATGATGCGCCCCGGCGAGCCGCCGACCGAGGACGCCGTGCAGGCCCTGTTCCAGCGCCTGTTCTACAACCCCGACACCTACGATCTTTCGCGCGTGGGCCGGATGAAGTTCAACGCCAAGGTCGGCCGCGATGGCGCCACCGGCCCCATGGTGCTGTCCAACGAGGACATCCTGGCCGTGGTCAAGATCCTGGTGGATCTGCGCAACGGCAAGGGCGAGGTCGATGACATCGACCACCTGGGCAACCGCCGCGTGCGTTGCGTGGGCGAACTGGCCGAGAACCAGTACCGCACGGGCCTGGCACGTATCGAGAAGGCCGTGAAGGAGCGTCTGGGTCAGGCCGAGCAAGAGCCGCTGATGCCCCATGACCTGATCAACAGCAAGCCGATTTCGGCCGCCCTGAAGGAATTCTTCGGTGCGTCGCAGCTGTCGCAGTTCATGGACCAGACCAATCCTCTGGCCGAAATCACGCACAAGCGTCGCGTCTCGGCCCTGGGCCCGGGCGGTCTGACGCGCGAGCGCGCAGGCTTCGAAGTGCGCGACGTGCACGTGACCCACTACGGCCGCGTCTGCCCTATCGAAACGCCTGAAGGCCCGAACATCGGCCTGATCAATTCGCTGGCCCTGTACGCCCGCCTGAACGAGTACGGCTTCATCGAGACGCCTTACCGTCGCGTGGCCGACGGCAAGGTCACGATGGAGATCGATTACCTGTCGGCCATCGAGGAAGGCAAGTACATCATCGCCCAGGCCAATGCCGAGCTGGATGCCGAAGGCCGCCTGATCGGCGACCTGGTGTCGGCGCGCGAAAAGGGTGATTCGACCCTGGTGTCGGCCGAGCGCGTTCAGTACATGGACGTGTCGCCCGCACAGATCGTGTCGGTGGCTGCCTCGCTGATTCCGTTCCTGGAGCACGATGACGCGAACCGCGCATTGATGGGCGCCAACATGTCGCGTCAGGCCGTGCCTGTGCTGCGTCCCGAAAAGCCCATGGTGGGCACGGGCATCGAGCGCGTGGCGGCAGTGGACTCCGGCACCGTGGTGACGGCAACCCGCGGCGGTATCGTGGACTATGTCGATGCAACGCGCATCGTGGTCCGCGTGAACGATGCGGAAGCCGTGGCCGGCGAAGTCGGCGTGGACATCTACAACCTCATCAAGTACCAGCGTTCCAACCAGAACACCAACATCCACCAGCGTCCCATCGTCAAGCGTGGCGACAAGCTGGCCAAGGGTGACGTGGTGGCCGACGGCGCATCGACCGACCTGGGCGAAATCGCCATCGGTCAGAACATGCTGATCGCCTTCATGCCCTGGAACGGCTACAACTTCGAGGATTCGATCCTGATCAACGAGCGCGTGGTGGCCGAAGACCGCTACACCTCGATCCATATCGAAGAACTCGTGGTGATGGCCCGCGACACCAAGCTCGGTGCCGAGGAAATCACGCGCGACATCCCGAACCTGTCCGAGCAGCAGCTCAACCGCCTGGACGAGTCCGGCATCATCTACGTGGGTGCGGAAGTGCAGCCCGGCGATGTGCTGGTCGGCAAGGTCACGCCCAAGGGCGAGACCACGCTGACGCCTGAAGAGAAGCTGCTGCGCGCCATCTTCGGCGAGAAGGCTTCCGACGTGAAGGACACCTCGCTGCGCGTGGACCAGGGCTCGCAAGGCACCGTGATCGACGTGCAGGTCTTCACCCGTGAAGGCATCCAGCGCGACAAGCGTGCCCAGCAGATCATCGACGATGAACTCAAGCGCTACCGCCTGGACCTGAACGACCAGCTGCGCATCGTCGAGGCCGACGCCTTCGACCGTATCGAGAAGCTGCTCAATGGCCGCGTGGCCAACGGCGGCCCGCAAAAGCTGGCCAAGGGCGCCAAGATCGACAAGGCCTACCTGGACGGCGTGGAGAAGTTCCACTGGTTCGACATCCGTCCTGCAGAGGACGAGGTCGCCACCCAGCTTGAGTCCATCAAGAACTCGCTGGAGCAGACGCGCCACAGCTTCGACCTGGCTTTCGAAGAAAAGCGCAAGAAGCTCACCCAGGGCGACGAGCTGCCCGCTGGCGTGCTCAAGATGGTCAAGGTCTACCTGGCCGTCAAGCGCCGCCTGCAGCCCGGCGACAAGATGGCCGGCCGCCACGGCAACAAGGGCGTGGTCTCCAAGATCGTTCCGGTCGAGGACATGCCCTACATGGCCGACGGCTCCACTGCCGACATCGTGCTGAACCCGCTGGGCGTGCCTTCGCGCATGAACATCGGCCAGGTGCTGGAAGTACATCTGGGCTGGGCCGGCAAGGGTCTGGGCCAGCGCATCGGCGACATGCTGCAGCAGGAAGCCCGTGCCGCCGAAATCCGTGCCTTCATGGAAGAGATCTACAACTCGCGCGGCCGCAAGGAAGACCTGGCCCAGCTCGATGACAACGAGATCGTGTCCATGGCGCAGGCGCTGACCACGGGCGTGCCGTTTGCCACGCCGGTGTTCGACGGCGCTTCCGAGCAGGAAATCCAGGACATGCTGCATCTGGCATATCCGGAAGAGCTGAAGGAGCGCAAGGGCCTGACCGAAAGCCGCACGCAGGCCTACCTGTATGACGGCCGCACCGGTGACCGCTTCGAGCGTCCGACCACCATCGGCTACATGCACTACCTGAAGCTGCACCACTTGGTCGACGACAAGATGCACGCCCGCTCCACGGGTCCGTACTCTCTGGTGACGCAGCAGCCTCTGGGCGGCAAGGCCCAGTTCGGCGGCCAGCGTTTCGGGGAAATGGAAGTGTGGGCGCTGGAAGCCTACGGCGCCGCCTATGTGCTGCAGGAAATGCTGACCGTGAAGTCCGACGACGTGGTGGGCCGTACCAAGGTGTACGAATCCATCGTCAAGGGCGAGCACGCCATCGAGGCAGGCATGCCCGAGTCGTTCAACGTGCTGGTCAAGGAAATCCGCTCCCTGGGCCTCGACATCGAGCTTGAGCGTTCTTAA
PROTEIN sequence
Length: 1371
MAYSYTERKRIRKSFGSRDSVLEVPYLLQMQKDAYTAFLQADVAPKKRTIEGLQAAFNSAFPIVSHNGFVEMKFVEYNLAKPAFDVRECQTRGLTFASAVRAKVQLIIYDRESSTSQSKVVKEVKEQEVYMGEVPLMTDKGSFIINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDLLFFRVDRRRKMPVSILLKAIGLTPESILANFFVNDNFRLMDSGAQMEFVPERLRGEVARFDITDKSGKVVVAKDKRVTARHTRELEQSGTKFISVPEDFLIGRVVAKNIVDPDTGEIIAKANEELTESLLKKLRSAGIQDLQCIYTNELDQGAYISQTLRTDETVDEFAARVAIYRMMRPGEPPTEDAVQALFQRLFYNPDTYDLSRVGRMKFNAKVGRDGATGPMVLSNEDILAVVKILVDLRNGKGEVDDIDHLGNRRVRCVGELAENQYRTGLARIEKAVKERLGQAEQEPLMPHDLINSKPISAALKEFFGASQLSQFMDQTNPLAEITHKRRVSALGPGGLTRERAGFEVRDVHVTHYGRVCPIETPEGPNIGLINSLALYARLNEYGFIETPYRRVADGKVTMEIDYLSAIEEGKYIIAQANAELDAEGRLIGDLVSAREKGDSTLVSAERVQYMDVSPAQIVSVAASLIPFLEHDDANRALMGANMSRQAVPVLRPEKPMVGTGIERVAAVDSGTVVTATRGGIVDYVDATRIVVRVNDAEAVAGEVGVDIYNLIKYQRSNQNTNIHQRPIVKRGDKLAKGDVVADGASTDLGEIAIGQNMLIAFMPWNGYNFEDSILINERVVAEDRYTSIHIEELVVMARDTKLGAEEITRDIPNLSEQQLNRLDESGIIYVGAEVQPGDVLVGKVTPKGETTLTPEEKLLRAIFGEKASDVKDTSLRVDQGSQGTVIDVQVFTREGIQRDKRAQQIIDDELKRYRLDLNDQLRIVEADAFDRIEKLLNGRVANGGPQKLAKGAKIDKAYLDGVEKFHWFDIRPAEDEVATQLESIKNSLEQTRHSFDLAFEEKRKKLTQGDELPAGVLKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSKIVPVEDMPYMADGSTADIVLNPLGVPSRMNIGQVLEVHLGWAGKGLGQRIGDMLQQEARAAEIRAFMEEIYNSRGRKEDLAQLDDNEIVSMAQALTTGVPFATPVFDGASEQEIQDMLHLAYPEELKERKGLTESRTQAYLYDGRTGDRFERPTTIGYMHYLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYVLQEMLTVKSDDVVGRTKVYESIVKGEHAIEAGMPESFNVLVKEIRSLGLDIELERS*