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scnpilot_cont_500_p_scaffold_283_curated_4

Organism: scnpilot_dereplicated_Delftia_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 4142..4702

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Chryseobacterium taeanense RepID=UPI0002E00149 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 186.0
  • Bit_score: 364
  • Evalue 8.20e-98
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:KFJ13873.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 186.0
  • Bit_score: 364
  • Evalue 1.10e-97
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 186.0
  • Bit_score: 363
  • Evalue 5.70e-98

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Taxonomy

Delftia acidovorans → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGATCTCCACCGCCGAGTCGCGCTACAACCAGTGGGTGCGCGAGCACTACCGATTCCTGCTGCGCAGCGCCTGGGCGCTGACCGGCTCGCGCGCGCTGGCCGAGGACGTGGTGCAGGACTGCTTCACCAGCGCCTGGCGCTTTCGCCACCAGCTGCGCGAGGCCGCGATGGCGCGGGCCTGGCTGTTCCAGATCATGCGCCGCCATGCCTTCCGGCACCTTGCGCCATCGGCCCATCTGGTCAGCGATGACGAGGCGCTGGACCAGCATCCCGCCCCCACTCCCTCGCCTTCGGCGCTGGACGACCGGCTCGACGTGGTCAAGGCGCTGTCGCGCATCGCCCCCATCCACCGCGAGGTGCTGGTGCTCTATTACTTCGACGACATGCCCACGGCCCAGATGGCCGAGGCCCTGGACATTGCGCCGGGCACGGTTCTGTCGCGCCTGTCACGCGCCCGCGATGCGCTGAAGGCGGCGCTGGAGCAGGCCGCCCCGGCGCCTGCCCCAGAGACTGCCAGCGTGATCCCGCTGCGCCCCACCCCGCTGCGCGCCACCCGATAG
PROTEIN sequence
Length: 187
MISTAESRYNQWVREHYRFLLRSAWALTGSRALAEDVVQDCFTSAWRFRHQLREAAMARAWLFQIMRRHAFRHLAPSAHLVSDDEALDQHPAPTPSPSALDDRLDVVKALSRIAPIHREVLVLYYFDDMPTAQMAEALDIAPGTVLSRLSRARDALKAALEQAAPAPAPETASVIPLRPTPLRATR*