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scnpilot_cont_500_p_scaffold_283_curated

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Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_283_curated_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(235..1524)
DNA (1290bp) protein (430aa)
glutamate carboxypeptidase (EC:3.4.17.11); K01295 glutamate carboxypeptidase [EC:3.4.17.11]
Glutamate carboxypeptidase n=2 Tax=Bacteria RepID=S2XUK6_DELAC
Glutamate carboxypeptidase {ECO:0000313|EMBL:EPD43189.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
scnpilot_cont_500_p_scaffold_283_curated_2
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1681..2955)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=S2WZ25_DELAC
MFS transporter {ECO:0000313|EMBL:KEH11048.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
major facilitator superfamily protein
scnpilot_cont_500_p_scaffold_283_curated_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3021..4043
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WLV7_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD40271.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
AraC family transcriptional regulator
scnpilot_cont_500_p_scaffold_283_curated_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4142..4702
DNA (561bp) protein (187aa)
RNA polymerase subunit sigma-24 n=1 Tax=Chryseobacterium taeanense RepID=UPI0002E00149
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:KFJ13873.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_cont_500_p_scaffold_283_curated_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4714..5301
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQK1_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFJ13701.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
scnpilot_cont_500_p_scaffold_283_curated_6
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5358..6611
DNA (1254bp) protein (418aa)
sulfite oxidase (EC:1.8.3.1); K07147
Sulfite oxidase {ECO:0000313|EMBL:AEF87099.1}; EC=1.8.3.1 {ECO:0000313|EMBL:AEF87099.1};; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
Sulfite oxidase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AYU3_DELSC
scnpilot_cont_500_p_scaffold_283_curated_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6707..7054
DNA (348bp) protein (116aa)
sulfite dehydrogenase (cytochrome) subunit SorB n=1 Tax=Chryseobacterium taeanense RepID=UPI00036C536E
Uncharacterized protein {ECO:0000313|EMBL:EPD43195.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
class I cytochrome c
scnpilot_cont_500_p_scaffold_283_curated_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7071..7895)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WUW0_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43196.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
type 12 methyltransferase
scnpilot_cont_500_p_scaffold_283_curated_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7920..8954)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XDA0_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43197.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
peptidoglycan-binding domain-containing protein
scnpilot_cont_500_p_scaffold_283_curated_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9151..10086)
DNA (936bp) protein (312aa)
ParB family chromosome partitioning protein n=2 Tax=Delftia acidovorans RepID=S2WTU6_DELAC
ParB family chromosome partitioning protein {ECO:0000313|EMBL:EPD40264.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
parB-like partition protein; K03497 chromosome partitioning protein, ParB family
scnpilot_cont_500_p_scaffold_283_curated_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10100..10645)
DNA (546bp) protein (182aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WKL6_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD40263.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein; K07002
scnpilot_cont_500_p_scaffold_283_curated_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10681..11451)
DNA (771bp) protein (257aa)
Chromosome partitioning protein n=2 Tax=Delftia acidovorans RepID=S2WZ37_DELAC
Chromosome partitioning protein {ECO:0000313|EMBL:EPD43200.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
cobyrinic acid ac-diamide synthase; K03496 chromosome partitioning protein
scnpilot_cont_500_p_scaffold_283_curated_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11465..12079)
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WLV1_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD40261.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
lysine exporter protein LysE/YggA
scnpilot_cont_500_p_scaffold_283_curated_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12186..12848)
DNA (663bp) protein (221aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
gidB; 16S rRNA methyltransferase GidB; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WQ95_DELAC
scnpilot_cont_500_p_scaffold_283_curated_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12845..14824)
DNA (1980bp) protein (660aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=2 Tax=Delftia acidovorans RepID=S2WTV3_DELAC
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
tRNA uridine 5-carboxymethylaminomethyl modification protein GidA; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme
scnpilot_cont_500_p_scaffold_283_curated_16
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15127..15714
DNA (588bp) protein (196aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WKL2_DELAC
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase {ECO:0000313|EMBL:EZP52198.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
scnpilot_cont_500_p_scaffold_283_curated_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15810..16418
DNA (609bp) protein (203aa)
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase domain n=4 Tax=Delftia RepID=A9BQI9_DELAS
Glutathione S-transferase {ECO:0000313|EMBL:EPD43205.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
scnpilot_cont_500_p_scaffold_283_curated_18
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16706..17824
DNA (1119bp) protein (373aa)
NADH:flavin oxidoreductase; K10680 N-ethylmaleimide reductase [EC:1.-.-.-]
12-oxophytodienoate reductase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002EFFC52
1,2-oxophytodienoate reductase {ECO:0000313|EMBL:KEH11349.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
scnpilot_cont_500_p_scaffold_283_curated_19
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17930..19633)
DNA (1704bp) protein (568aa)
Uncharacterized protein n=3 Tax=Bacteria RepID=S2WQ92_DELAC
Chemotaxis protein {ECO:0000313|EMBL:KEH11348.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
methyl-accepting chemotaxis sensory transducer
scnpilot_cont_500_p_scaffold_283_curated_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19934..20128
DNA (195bp) protein (65aa)
Heavy metal transport/detoxification protein n=4 Tax=Delftia RepID=A9BPB8_DELAS
heavy metal transport/detoxification protein; K07213 copper chaperone
Copper chaperone {ECO:0000313|EMBL:EPD40254.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_283_curated_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20150..20587
DNA (438bp) protein (146aa)
Cu(I)-responsive transcriptional regulator n=2 Tax=Delftia acidovorans RepID=S2WKL0_DELAC
Cu(I)-responsive transcriptional regulator {ECO:0000313|EMBL:EPD40253.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
MerR family transcriptional regulator
scnpilot_cont_500_p_scaffold_283_curated_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20602..22227
DNA (1626bp) protein (542aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WZ51_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD40252.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
transcriptional regulator
scnpilot_cont_500_p_scaffold_283_curated_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22428..23183)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WLT7_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD40251.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
TetR family transcriptional regulator
scnpilot_cont_500_p_scaffold_283_curated_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23314..24198
DNA (885bp) protein (295aa)
Branched-chain amino acid transport system ATP-binding protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WQ89_DELAC
Branched-chain amino acid transport system ATP-binding protein {ECO:0000313|EMBL:EPD40250.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein
scnpilot_cont_500_p_scaffold_283_curated_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24195..25076
DNA (882bp) protein (294aa)
ABC transporter permease n=1 Tax=Chryseobacterium taeanense RepID=UPI00031507D1
Branched-chain amino acid transport system permease {ECO:0000313|EMBL:EPD40249.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
scnpilot_cont_500_p_scaffold_283_curated_26
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25099..26136
DNA (1038bp) protein (346aa)
Branched-chain amino acid transport system permease n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XUM2_DELAC
ABC transporter permease {ECO:0000313|EMBL:KEH11065.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
scnpilot_cont_500_p_scaffold_283_curated_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26173..27354
DNA (1182bp) protein (394aa)
Branched-chain amino acid transport system substrate-binding protein n=2 Tax=Delftia acidovorans RepID=S2WZ54_DELAC
Branched-chain amino acid transport system substrate-binding protein {ECO:0000313|EMBL:EPD40247.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
scnpilot_cont_500_p_scaffold_283_curated_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27380..28198
DNA (819bp) protein (273aa)
Branched-chain amino acid transport system ATP-binding protein n=2 Tax=Delftia acidovorans RepID=S2WLT4_DELAC
Branched-chain amino acid transport system ATP-binding protein {ECO:0000313|EMBL:EPD43216.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein
scnpilot_cont_500_p_scaffold_283_curated_29
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28344..30179
DNA (1836bp) protein (612aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3); K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
Long-chain acyl-CoA synthetase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XDB4_DELAC
Long-chain acyl-CoA synthetase {ECO:0000313|EMBL:EPD43217.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
scnpilot_cont_500_p_scaffold_283_curated_30
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30187..30975
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WTW2_DELAC
Enoyl-CoA hydratase {ECO:0000313|EMBL:KEH11066.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
enoyl-CoA hydratase/isomerase
Displaying items 1-30 of 83 in total

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