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SCNpilot_expt_1000_bf_scaffold_29_curated_21

Organism: scnpilot_dereplicated_Devosia_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 19578..20951

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway VirD4 component n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUP5_NITWN similarity UNIREF
DB: UNIREF100
  • Identity: 79.1
  • Coverage: 449.0
  • Bit_score: 748
  • Evalue 4.90e-213
type IV secretory pathway VirD4 components; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 79.1
  • Coverage: 449.0
  • Bit_score: 748
  • Evalue 1.50e-213
Type IV secretory pathway VirD4 component {ECO:0000313|EMBL:ABA03996.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 449.0
  • Bit_score: 748
  • Evalue 6.90e-213

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Taxonomy

Nitrobacter winogradskyi → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1374
ATGAAGCATCCCAGCGAATACAAAAATCTACGCAAAGGTATTGAGCTCGGCTTCTTTAACAAGAAGCCGATTGTCTATGGCGGCACCGAACCTGTCGCCATTGATGCGCAGGCGGGCAAAGGCAAGCTCACACGGTTCCTCGGTGTCAACCTGGTCTCACCGCGCACGGCGCATCTGACCAAAATCATCACTGATCCGAAAGATGGAGAGCTTGCCTGGGTGTCCTGGAAGACGCTTGAACGCCAAGGCTATCAGGTCCGATTTATCAATCCCGGCAATCTCTATAGCTATCGCACAGACAGCTACAACATTAATACCCGCGTCATTGAGATTGCCGCGCGACCTGACCTCTACGGCATTTTGAACGAAGCGGCTTATGATGCTGCCAGCTATCTTGTGCCGATTGATCCCAACCCTGCGCATCGGTGGATCGGGCAAGGCGTTCGCTCTGCTTTTGCGCTCTACAATAAGATTACAGCGCGATTCCCAACGACGCGTTGGCCTTGCACACCTGGCGGGCTCTGGGACTTTTACGGACGTGCTGCCTATGAGATTGCCGATGATCTTTTGCTTTGGGCCAGTGATAACCGCCTGGAAGATGACTCCGGCATGTGCAGGCAAATTGCAGGCCTGACTGCCTCAACCGATCAATGGAATGCCTACTCCTCTCTCATCATCGAAAGGCTGCAAGCCTTTCAGCCTGGTGCAGCGGCACGTGGTGTTACCGAGCGCAACACATTCGATCCGGCTGAAATGAAGTCCACGCCAACTGCGCTTTTCATCATTGGATCGGCAACTTCAGAGAGTAGCCGAAGTTTTGTCGGCGCGATGATAGCAGCGATTGTGCAGCGGTTTGTGACCGCGCACGGTCCGCTGCGCGCGCTCGTCGTGGGCGAAGAATGGGGACAGCTATATGTCTCCAACTTCCATGAAATCCTGACGCTCTACCGCGAAGGCGGTATCAATTTTCTGGGCGTGTTTCAGAACGCCGCCGCACAAATTGAATCGCGCTATGGCCGGGAAACATCGCGGCTCTGGAAAAAGGCCGTGGCCCATACGCTCTATCGCGGTCTGCCCGACGATCAGACGCTCAAAGACATCGAGCACCGCTCAGGCAAAACCTCTGTCATGGTGCGAGGCTTCAACGTCAACAACAACCAGGTCAACGGTTCCGGCGACAACCTCGTGGAGCAGTCGCGCCCGCTCTTACAAGTGGAAGATATTCGCGCGGCCACAGGTGGCAGCAAGGCGCTGCTGGAATCCCGTGATCAAGGATTTTTCACGGTGGAGATGCCGAATTTTTGGGAACGGCCCGAGCTAACAGGTCTGCTGCGCGATGTGCGCGAAAAGCCCGAAAGGTATATTTTAGTATAG
PROTEIN sequence
Length: 458
MKHPSEYKNLRKGIELGFFNKKPIVYGGTEPVAIDAQAGKGKLTRFLGVNLVSPRTAHLTKIITDPKDGELAWVSWKTLERQGYQVRFINPGNLYSYRTDSYNINTRVIEIAARPDLYGILNEAAYDAASYLVPIDPNPAHRWIGQGVRSAFALYNKITARFPTTRWPCTPGGLWDFYGRAAYEIADDLLLWASDNRLEDDSGMCRQIAGLTASTDQWNAYSSLIIERLQAFQPGAAARGVTERNTFDPAEMKSTPTALFIIGSATSESSRSFVGAMIAAIVQRFVTAHGPLRALVVGEEWGQLYVSNFHEILTLYREGGINFLGVFQNAAAQIESRYGRETSRLWKKAVAHTLYRGLPDDQTLKDIEHRSGKTSVMVRGFNVNNNQVNGSGDNLVEQSRPLLQVEDIRAATGGSKALLESRDQGFFTVEMPNFWERPELTGLLRDVREKPERYILV*