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SCNpilot_expt_1000_bf_scaffold_29_curated

Search features with annotation key words

Displaying items 1-30 of 602 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_29_curated_1
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..602
DNA (600bp) protein (200aa)
Pentapeptide repeat-containing protein n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JL04_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KFL29521.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
pentapeptide repeat-containing protein
SCNpilot_expt_1000_bf_scaffold_29_curated_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

749..2884
DNA (2136bp) protein (712aa)
Mechanosensitive ion channel protein MscS n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q1K1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB07564.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
MscS mechanosensitive ion channel; K03442 small conductance mechanosensitive channel
SCNpilot_expt_1000_bf_scaffold_29_curated_3
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3056..4270
DNA (1215bp) protein (405aa)
Membrane-bound lytic murein transglycosylase B n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCL8_PELHB
Lytic transglycosylase {ECO:0000313|EMBL:KFL29522.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
membrane-bound lytic murein transglycosylase B
SCNpilot_expt_1000_bf_scaffold_29_curated_4
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4473..5441
DNA (969bp) protein (323aa)
Esterase/lipase/thioesterase family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RED0_PELHB
Esterase/lipase/thioesterase family protein {ECO:0000313|EMBL:KFC62001.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
esterase
SCNpilot_expt_1000_bf_scaffold_29_curated_5
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5533..6147
DNA (615bp) protein (205aa)
UPI0003CF1B45 related cluster n=1 Tax=unknown RepID=UPI0003CF1B45
Uncharacterized protein {ECO:0000313|EMBL:KFC62002.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_29_curated_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6166..6579)
DNA (414bp) protein (138aa)
Putative lactoylglutathione lyase n=1 Tax=Polaromonas sp. CF318 RepID=J2LNC0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KKB07562.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_29_curated_7
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6657..7142)
DNA (486bp) protein (162aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Bacterioferritin n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X528_OCHA4
bacterioferritin; K03594 bacterioferritin
SCNpilot_expt_1000_bf_scaffold_29_curated_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7108..7419)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REC2_PELHB
(2Fe-2S)-binding protein {ECO:0000313|EMBL:KKB07560.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_29_curated_9
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7540..8868
DNA (1329bp) protein (443aa)
hypothetical protein n=3 Tax=Vibrio splendidus RepID=UPI0002E04050
Uncharacterized protein {ECO:0000313|EMBL:CDP51957.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_29_curated_10
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8922..9626)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REB9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07559.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_29_curated_11
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9761..10798)
DNA (1038bp) protein (346aa)
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HTV9_9RHIZ
Aldo/keto reductase {ECO:0000313|EMBL:KKB76947.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
oxidoreductase, aldo/keto reductase family
SCNpilot_expt_1000_bf_scaffold_29_curated_12
Pseudomonas sp. WCS358, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11349..11906)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM84 RepID=J3IVU2_9PSED
Uncharacterized protein {ECO:0000313|EMBL:KEY88661.1}; TaxID=1495066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. WCS358.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_29_curated_13
unknown

Not on your lists

comp(11944..12120)
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_29_curated_14
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12084..14153)
DNA (2070bp) protein (690aa)
neutral endopeptidase (EC:3.4.24.-)
Peptidase M13 n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FC17_9RHIZ
Peptidase M13 {ECO:0000313|EMBL:EHS49620.1}; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
SCNpilot_expt_1000_bf_scaffold_29_curated_15
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14394..15389
DNA (996bp) protein (332aa)
SH3 type 3 domain protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S418_9RHOB
SH3 type 3 domain protein {ECO:0000313|EMBL:EEW24280.1}; Flags: Precursor;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;"
Gifsy-1 prophage protein
SCNpilot_expt_1000_bf_scaffold_29_curated_16
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15723..16421)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Ensifer adhaerens RepID=I0FX81_ENSAD
Uncharacterized protein {ECO:0000313|EMBL:KFL28452.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_29_curated_17
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17127..17564
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUP8_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA03993.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_expt_1000_bf_scaffold_29_curated_18
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17561..18832
DNA (1272bp) protein (424aa)
Relaxase/mobilization nuclease n=1 Tax=Rhizobium sp. CF142 RepID=J2AV47_9RHIZ
Relaxase/mobilization nuclease {ECO:0000313|EMBL:EJJ27300.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_29_curated_19
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18848..19354
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1Z8U1_METPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB83243.1}; Flags: Precursor;; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
SCNpilot_expt_1000_bf_scaffold_29_curated_20
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19354..19581
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J2L1B9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ27302.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_29_curated_21
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19578..20951
DNA (1374bp) protein (458aa)
Type IV secretory pathway VirD4 component n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUP5_NITWN
type IV secretory pathway VirD4 components; K03205 type IV secretion system protein VirD4
Type IV secretory pathway VirD4 component {ECO:0000313|EMBL:ABA03996.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_expt_1000_bf_scaffold_29_curated_22
unknown

Not on your lists

21475..21660
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_29_curated_23
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21863..23707
DNA (1845bp) protein (615aa)
Cadmium-translocating P-type ATPase n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KNR4_MICAA
cadmium-translocating P-type ATPase
Cadmium-translocating P-type ATPase {ECO:0000313|EMBL:AEP10309.1}; TaxID=856793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus (strain ARL-13).;"
SCNpilot_expt_1000_bf_scaffold_29_curated_24
Shewanella baltica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24692..25624)
DNA (933bp) protein (311aa)
Uncharacterized protein n=2 Tax=Shewanella baltica RepID=E6SXG3_SHEB6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX50507.1}; TaxID=399599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella baltica (strain OS195).;"
SCNpilot_expt_1000_bf_scaffold_29_curated_25
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25988..28102
DNA (2115bp) protein (705aa)
hypothetical protein n=1 Tax=Ochrobactrum anthropi RepID=UPI000288DC5E
Uncharacterized protein {ECO:0000313|EMBL:KJC52555.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_29_curated_26

Not on your lists

28193..28810
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI0003691F98
Putative mannitol operon repressor {ECO:0000313|EMBL:EKD28375.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative mannitol operon repressor
SCNpilot_expt_1000_bf_scaffold_29_curated_27
unknown

Not on your lists

comp(29215..29952)
DNA (738bp) protein (246aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_29_curated_28
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30216..30533
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J2L1C8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ27312.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
SCNpilot_expt_1000_bf_scaffold_29_curated_29
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30530..32107
DNA (1578bp) protein (526aa)
Resolvase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUN8_NITWN
resolvase
Resolvase {ECO:0000313|EMBL:ABA04003.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_expt_1000_bf_scaffold_29_curated_30
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32574..34871
DNA (2298bp) protein (766aa)
Organic solvent tolerance protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGK1_PELHB
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
organic solvent tolerance protein; K04744 LPS-assembly protein
Displaying items 1-30 of 602 in total

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