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SCNpilot_cont_300_bf_scaffold_423_curated

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_423_curated_1
unknown

Not on your lists

3..74
DNA (72bp) protein (24aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_423_curated_2
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

162..1313
DNA (1152bp) protein (384aa)
Oxidoreductase domain protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R824_PELHB
Oxidoreductase domain protein {ECO:0000313|EMBL:KFC69953.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
oxidoreductase domain-containing protein
SCNpilot_cont_300_bf_scaffold_423_curated_3
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1428..2171)
DNA (744bp) protein (248aa)
permease n=1 Tax=Cupriavidus sp. WS RepID=UPI00036462CB
Permease {ECO:0000313|EMBL:KKB83186.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
hypothetical protein; K07090
SCNpilot_cont_300_bf_scaffold_423_curated_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2175..3098)
DNA (924bp) protein (308aa)
GumN family protein n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003AA818B
Uncharacterized protein {ECO:0000313|EMBL:KKB09355.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein; K09973 hypothetical protein
SCNpilot_cont_300_bf_scaffold_423_curated_5
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3112..3417)
DNA (306bp) protein (102aa)
Oxidoreductase, putative n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R829_PELHB
ETC complex I subunit {ECO:0000313|EMBL:KKB12798.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
oxidoreductase
SCNpilot_cont_300_bf_scaffold_423_curated_6
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3635..4405
DNA (771bp) protein (257aa)
Phosphoesterase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UA87_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KFL26250.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
phosphoesterase, PA-phosphatase-like protein
SCNpilot_cont_300_bf_scaffold_423_curated_7
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4395..5582)
DNA (1188bp) protein (396aa)
Cystathionine beta-lyase {ECO:0000313|EMBL:CDP53571.1}; EC=4.4.1.8 {ECO:0000313|EMBL:CDP53571.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
cystathionine beta-lyase; K01760 cystathionine beta-lyase [EC:4.4.1.8]
Cystathionine beta-lyase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R831_PELHB
SCNpilot_cont_300_bf_scaffold_423_curated_8
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5799..6830
DNA (1032bp) protein (344aa)
General L-amino acid-binding periplasmic protein AapJ n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CD80_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKB80902.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
glutamate aspartate periplasmic binding protein GltI; K09969 general L-amino acid transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_423_curated_9
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6947..8134
DNA (1188bp) protein (396aa)
Amino acid ABC transporter, permease protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R833_PELHB
Amino acid ABC transporter permease {ECO:0000313|EMBL:KFL31715.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
amino acid ABC transporter permease; K09970 general L-amino acid transport system permease protein
SCNpilot_cont_300_bf_scaffold_423_curated_10
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8144..9268
DNA (1125bp) protein (375aa)
Glutamate aspartate transport system permease protein GltK n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R834_PELHB
Amino acid ABC transporter permease {ECO:0000313|EMBL:KKB09360.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
glutamate aspartate transport system permease protein GltK; K09971 general L-amino acid transport system permease protein
SCNpilot_cont_300_bf_scaffold_423_curated_11
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9513..10016
DNA (504bp) protein (168aa)
polar amino acid ABC transporter ATPase; K09972 general L-amino acid transport system ATP-binding protein [EC:3.6.3.-]
ABC-type polar amino acid transport system, ATPase component n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R835_PELHB
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFL26245.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
SCNpilot_cont_300_bf_scaffold_423_curated_12
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10195..11250
DNA (1056bp) protein (352aa)
ABC glutamate/glutamine/aspartate/asparagine transporter, periplasmic substrate-binding protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R836_PELHB
Glutamate/glutamine/aspartate/asparagine ABC trans porter, periplasmic substrate-binding protein {ECO:0000313|EMBL:CDP53577.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
glutamate/glutamine/aspartate/asparagine ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_423_curated_13
unknown

Not on your lists

11447..11761
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_423_curated_14
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11808..12518)
DNA (711bp) protein (237aa)
Alanyl-transfer RNA synthetase domain protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IXB9_POLGS
Ala-tRNA(Pro) hydrolase {ECO:0000313|EMBL:KKC32081.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
alaS2; alanyl-tRNA synthetase; K07050
SCNpilot_cont_300_bf_scaffold_423_curated_15
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12515..13567)
DNA (1053bp) protein (351aa)
pyridoxal-5'-phosphate-dependent protein subunit beta; K01738 cysteine synthase A [EC:2.5.1.47]
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R838_PELHB
Cysteine synthase {ECO:0000313|EMBL:KKB83772.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
SCNpilot_cont_300_bf_scaffold_423_curated_16
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13779..15152)
DNA (1374bp) protein (458aa)
deoxyribodipyrimidine photolyase; K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Deoxyribodipyrimidine photolyase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R839_PELHB
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:KKB83771.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
SCNpilot_cont_300_bf_scaffold_423_curated_17
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15349..16266
DNA (918bp) protein (306aa)
sulfate adenylyltransferase subunit 2; K00957 sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
Sulfate adenylyltransferase subunit 2 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGV5_PELHB
Sulfate adenylyltransferase subunit 2 {ECO:0000313|EMBL:AEQ53108.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCNpilot_cont_300_bf_scaffold_423_curated_18
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16266..18182
DNA (1917bp) protein (639aa)
Adenylyltransferase {ECO:0000313|EMBL:KFL26239.1}; EC=2.7.1.25 {ECO:0000313|EMBL:KFL26239.1};; EC=2.7.7.4 {ECO:0000313|EMBL:KFL26239.1};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase; K00955 bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
Sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R842_PELHB
SCNpilot_cont_300_bf_scaffold_423_curated_19
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18363..19892
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3KEM3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KAJ36590.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
probable GTP binding protein
SCNpilot_cont_300_bf_scaffold_423_curated_20
unknown

Not on your lists

comp(19896..20219)
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_423_curated_21
unknown

Not on your lists

comp(20473..20682)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_423_curated_22
Roseivivax atlanticus, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20941..21990)
DNA (1050bp) protein (350aa)
Poly(Beta-D-mannuronate) lyase {ECO:0000313|EMBL:ETW14764.1}; EC=4.2.2.3 {ECO:0000313|EMBL:ETW14764.1};; TaxID=1317118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax atlanticus.;"
poly(beta-D-mannuronate) lyase (EC:4.2.2.3); K01729 poly(beta-D-mannuronate) lyase [EC:4.2.2.3]
Alginate lyase n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9S740_9RHOB
SCNpilot_cont_300_bf_scaffold_423_curated_23
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21992..24721)
DNA (2730bp) protein (910aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00037066C2
Uncharacterized protein {ECO:0000313|EMBL:CDM62616.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
hypothetical protein; K07126
SCNpilot_cont_300_bf_scaffold_423_curated_24
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24794..25435)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003629C63
Putative secreted protein {ECO:0000313|EMBL:CDM62615.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
SCNpilot_cont_300_bf_scaffold_423_curated_25
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25447..26772)
DNA (1326bp) protein (442aa)
Alginate biosynthesis protein AlgX n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QAM5_9RHIZ
Alginate biosynthesis protein AlgX {ECO:0000313|EMBL:EKF60924.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
algX; alginate biosynthesis protein AlgX
SCNpilot_cont_300_bf_scaffold_423_curated_26
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26769..27575)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7ER32_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ESW62627.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
SCNpilot_cont_300_bf_scaffold_423_curated_27
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27572..28675)
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00037C750E
Uncharacterized protein {ECO:0000313|EMBL:EKF60922.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_423_curated_28
unknown

Not on your lists

comp(28684..28890)
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_423_curated_29
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28908..30059)
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00036E554B
Poly(Beta-D-mannuronate) O-acetylase {ECO:0000313|EMBL:GAK72562.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
membrane bound O-acyl transferase MBOAT family protein
SCNpilot_cont_300_bf_scaffold_423_curated_30
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30059..31579)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q6P9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF60920.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
Displaying items 1-30 of 83 in total

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