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SCNpilot_cont_300_bf_scaffold_152_curated

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Displaying items 1-30 of 578 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_152_curated_1
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88..2052)
DNA (1965bp) protein (655aa)
Choline dehydrogenase-like flavoprotein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z266_9RHIZ
Choline dehydrogenase-like flavoprotein {ECO:0000313|EMBL:EIM30308.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
Choline dehydrogenase and related flavoproteins
SCNpilot_cont_300_bf_scaffold_152_curated_2
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2073..2909)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00035D61E1
ABC transporter permease {ECO:0000313|EMBL:KHL03556.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
putative sugar ABC transporter, permease component
SCNpilot_cont_300_bf_scaffold_152_curated_3
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2906..3805)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI0003797063
Transporter {ECO:0000313|EMBL:KIC68939.1}; TaxID=361575 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans.;"
binding-protein-dependent transporters inner membrane component; K02025 multiple sugar transport system permease protein
SCNpilot_cont_300_bf_scaffold_152_curated_4
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3835..5133)
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00036A8D2C
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:ABK01976.1}; Flags: Precursor;; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
SCNpilot_cont_300_bf_scaffold_152_curated_5
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5479..6495
DNA (1017bp) protein (339aa)
Putative transcriptional regulator, LacI family protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CHJ1_9RHOB
Putative transcriptional regulator, LacI family protein {ECO:0000313|EMBL:EAR52048.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus (strain ATCC BAA-861 / DSM 15982 / KCTC 12143 /; HTCC2516).;"
transcriptional regulator protein; K02529 LacI family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_152_curated_6
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6492..7253)
DNA (762bp) protein (254aa)
xylose isomerase n=1 Tax=Rhizobium leguminosarum RepID=UPI0003646478
Uncharacterized protein {ECO:0000313|EMBL:EYD77920.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
sugar phosphate isomerase/epimerase
SCNpilot_cont_300_bf_scaffold_152_curated_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7554..8345
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036261DC
IclR family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
SCNpilot_cont_300_bf_scaffold_152_curated_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

8342..9229
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037527E0
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:ADB53513.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_cont_300_bf_scaffold_152_curated_9
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

9244..10533
DNA (1290bp) protein (430aa)
class III aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000367567B
Aminotransferase class-III {ECO:0000313|EMBL:ABU59880.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
SCNpilot_cont_300_bf_scaffold_152_curated_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

10784..12109
DNA (1326bp) protein (442aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035FEF00
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADB48607.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_cont_300_bf_scaffold_152_curated_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

12298..13200
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000368EA10
binding-protein-dependent transporters inner membrane component; K02025 multiple sugar transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADB48608.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_cont_300_bf_scaffold_152_curated_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

13200..14084
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003663ECF
binding-protein-dependent transporters inner membrane component; K02026 multiple sugar transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADB48609.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_cont_300_bf_scaffold_152_curated_13
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14081..15130
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037ED6DB
NADH-dependent dehydrogenase {ECO:0000313|EMBL:EAR25883.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
oxidoreductase domain-containing protein
SCNpilot_cont_300_bf_scaffold_152_curated_14
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15127..16725
DNA (1599bp) protein (533aa)
N-acyl-D-amino-acid deacylase; K06015 N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036E26DF
N-acyl-D-amino-acid deacylase {ECO:0000313|EMBL:AEK44693.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
SCNpilot_cont_300_bf_scaffold_152_curated_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

16728..17891
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003668BE4
alanine racemase
Alanine racemase domain protein {ECO:0000313|EMBL:ADB48615.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_cont_300_bf_scaffold_152_curated_16
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17913..18956
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000375F9FC
3-carboxymuconate cyclase {ECO:0000313|EMBL:KHD74319.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_152_curated_17
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19213..20079
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036215A9
Transcriptional regulator, IclR family {ECO:0000313|EMBL:CDX24551.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
IclR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_152_curated_18
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20076..20540
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00036358F6
Uncharacterized protein {ECO:0000313|EMBL:KEC79209.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_152_curated_19
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20638..21489
DNA (852bp) protein (284aa)
mepA; murein endopeptidase transmembrane protein; K07261 penicillin-insensitive murein endopeptidase [EC:3.4.24.-]
Murein endopeptidase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4R327_9RHIZ
Peptidase {ECO:0000313|EMBL:KFL28461.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
SCNpilot_cont_300_bf_scaffold_152_curated_20
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21689..22504)
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI000370E6DE
Uncharacterized protein {ECO:0000313|EMBL:KFL31974.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
AraC family transcriptional regulator; K02099 AraC family transcriptional regulator, arabinose operon regulatory protein
SCNpilot_cont_300_bf_scaffold_152_curated_21
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22592..23419
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003803155
Uncharacterized protein {ECO:0000313|EMBL:KFL31975.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
oxidoreductase
SCNpilot_cont_300_bf_scaffold_152_curated_22
Arthrobacter sp. Rue61a, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23470..24807)
DNA (1338bp) protein (446aa)
bglA3; beta-glucosidase A (EC:3.2.1.21)
Beta-glucosidase A {ECO:0000313|EMBL:AFR28760.1}; EC=3.2.1.21 {ECO:0000313|EMBL:AFR28760.1};; TaxID=1118963 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. Rue61a.;"
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00037A42CE
SCNpilot_cont_300_bf_scaffold_152_curated_23
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24887..26173)
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI0003725684
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:CDK01426.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
sugar ABC transporter periplasmic protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_152_curated_24
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26247..27149)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI0003732CC8
Multiple sugar transporter permease {ECO:0000313|EMBL:EWM18801.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
multiple sugar transport system permease protein
SCNpilot_cont_300_bf_scaffold_152_curated_25
Cellulosimicrobium sp. MM, Cellulosimicrobium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27146..28036)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI0003806830
putative integral membrane transport protein; K02025 multiple sugar transport system permease protein
Sugar ABC transporter permease {ECO:0000313|EMBL:KFD42802.1}; TaxID=1523621 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Cellulosimicrobium.;" source="Cellulosimicrobium sp. MM.;"
SCNpilot_cont_300_bf_scaffold_152_curated_26
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28212..30302)
DNA (2091bp) protein (697aa)
bga19; putative beta-galactosidase; K12308 beta-galactosidase [EC:3.2.1.23]
Putative beta-galactosidase n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WDS2_9ACTO
Putative beta-galactosidase {ECO:0000313|EMBL:EFL20982.1}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
SCNpilot_cont_300_bf_scaffold_152_curated_27
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30496..31518
DNA (1023bp) protein (341aa)
Putative LacI family transcriptional regulator n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NJL7_KITSK
putative LacI family transcriptional regulator
Putative LacI family transcriptional regulator {ECO:0000313|EMBL:BAJ33165.1}; TaxID=452652 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC; A-0304 / NBRC 14216 / KM-6054) (Streptomyces setae).;"
SCNpilot_cont_300_bf_scaffold_152_curated_28
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31522..32412)
DNA (891bp) protein (297aa)
PHP C-terminal domain protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) RepID=A3PK25_RHOS1
phosphotransferase domain-containing protein; K07053
PHP C-terminal domain protein {ECO:0000313|EMBL:ABN76691.1}; TaxID=349101 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9).;"
SCNpilot_cont_300_bf_scaffold_152_curated_29
Roseivivax isoporae, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32431..34221)
DNA (1791bp) protein (597aa)
Peptide/nickel/opine uptake family ABC transporter, ATP-binding protein, putative n=1 Tax=Sagittula stellata E-37 RepID=A3JYQ2_9RHOB
Glutathione ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETX29254.1}; TaxID=1449351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax isoporae LMG 25204.;"
peptide/nickel/opine uptake ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_152_curated_30
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34461..36014)
DNA (1554bp) protein (518aa)
Agrocinopine ABC transporter substrate-binding protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MZB8_9RHIZ
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB13475.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
Agrocinopine ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein
Displaying items 1-30 of 578 in total

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