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SCNpilot_cont_300_bf_scaffold_337_curated

Search features with annotation key words

Displaying items 1-30 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_337_curated_1
unknown

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2..94
DNA (93bp) protein (31aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_337_curated_2

Not on your lists

140..1189
DNA (1050bp) protein (350aa)
Mannonate dehydratase {ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|SAAS:SAAS00189414};; TaxID=548898 species="Bacteria; environmental samples.;" source="uncultured bacterium 1062.;"
mannonate dehydratase (EC:4.2.1.8); K01686 mannonate dehydratase [EC:4.2.1.8]
Putative uncharacterized protein n=1 Tax=uncultured bacterium 1062 RepID=B8R8W3_9BACT
SCNpilot_cont_300_bf_scaffold_337_curated_3
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1237..2217)
DNA (981bp) protein (327aa)
Xylose isomerase {ECO:0000256|RuleBase:RU000609, ECO:0000256|SAAS:SAAS00108511}; EC=5.3.1.5 {ECO:0000256|RuleBase:RU000609, ECO:0000256|SAAS:SAAS00108511};; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
putative xylose isomerase (EC:5.3.1.5)
Xylose isomerase n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F2U6_9RHIZ
SCNpilot_cont_300_bf_scaffold_337_curated_4
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2247..3719)
DNA (1473bp) protein (491aa)
glpK1; glycerol kinase (EC:2.7.1.30); K00864 glycerol kinase [EC:2.7.1.30]
Glycerol kinase n=1 Tax=Rhodobacter capsulatus B6 RepID=V8GK14_RHOCA
Glycerol kinase {ECO:0000313|EMBL:KKB82542.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
SCNpilot_cont_300_bf_scaffold_337_curated_5
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3716..4669)
DNA (954bp) protein (318aa)
tktB; transketolase, C-terminal subunit (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1]
Uncharacterized protein n=1 Tax=Asticcacaulis sp. YBE204 RepID=V4NSI6_9CAUL
Transketolase {ECO:0000313|EMBL:KKB07068.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
SCNpilot_cont_300_bf_scaffold_337_curated_6
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4669..5511)
DNA (843bp) protein (281aa)
tktA; transketolase, N-terminal subunit (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1]
Transketolase subunit A n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9R1E9_9RHOB
Transketolase {ECO:0000313|EMBL:KKB07067.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
SCNpilot_cont_300_bf_scaffold_337_curated_7
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5763..6602
DNA (840bp) protein (280aa)
Transcriptional regulator, DeoR family n=1 Tax=Rhodobacter sp. SW2 RepID=C8RWW8_9RHOB
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EEW27061.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;"
DeoR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_337_curated_8
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7005..7970
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003800F37
Uncharacterized protein {ECO:0000313|EMBL:KKB07065.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_337_curated_9
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7963..8913
DNA (951bp) protein (317aa)
Extracellular solute-binding protein, family 5 n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WFA8_VEREI
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:KFC71746.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_337_curated_10
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8987..9988
DNA (1002bp) protein (334aa)
Oligopeptide ABC transporter, permease protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CGU3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKB82547.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein
SCNpilot_cont_300_bf_scaffold_337_curated_11
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9985..10890
DNA (906bp) protein (302aa)
Oligopeptide ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RRQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKB82596.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein
SCNpilot_cont_300_bf_scaffold_337_curated_12
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10887..11792
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003802791
(GlcNAc)2 ABC transporter, ATP-binding component 1 {ECO:0000313|EMBL:KFC71749.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
peptide ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_337_curated_13
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11789..12610
DNA (822bp) protein (274aa)
Oligopeptide transport ATP-binding protein OppF n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R321_9FIRM
Putative peptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:KFC71750.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
ABC transporter-like protein; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_337_curated_14
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12800..14383
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I7P2_CALAS
Alpha-L-rhamnosidase {ECO:0000313|EMBL:KKB07061.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_337_curated_15
Deinococcus gobiensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

14409..15179
DNA (771bp) protein (257aa)
Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0) RepID=H8H0J6_DEIGI
Oxidoreductase, short chain dehydrogenase/reductase family
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:AFD27248.1}; TaxID=745776 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 /; I-0).;"
SCNpilot_cont_300_bf_scaffold_337_curated_16
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15263..16771
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V6S1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN86732.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_337_curated_17
RLO_PLX_64_10, Bacteria

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comp(16904..17938)
DNA (1035bp) protein (345aa)
putative aldo/keto reductase family protein; K00064 D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037B1BA1
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCNpilot_cont_300_bf_scaffold_337_curated_18
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18040..18474)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4N7Z3_KITSK
Uncharacterized protein {ECO:0000313|EMBL:KKC39654.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_337_curated_19
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18452..18895)
DNA (444bp) protein (148aa)
Putative oxidoreductase n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AEH5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KFL31309.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
flavin reductase domain-containing FMN-binding protein
SCNpilot_cont_300_bf_scaffold_337_curated_20
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19050..19652
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AEH6_9ACTN
PadR family transcriptional regulator {ECO:0000313|EMBL:KFL31310.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
PadR-like family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_337_curated_21
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19827..21176)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AEH7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KFL31311.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_337_curated_22
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21218..22033)
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002DF5187
ABC transporter permease {ECO:0000313|EMBL:KKC39919.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
binding--dependent transport system inner membrane component family protein
SCNpilot_cont_300_bf_scaffold_337_curated_23
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22026..22832)
DNA (807bp) protein (269aa)
ABC transporter (ATP-binding protein) n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AEH9_9ACTN
Sulfonate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB83101.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
ABC transporter
SCNpilot_cont_300_bf_scaffold_337_curated_24
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22857..23978)
DNA (1122bp) protein (374aa)
Thiamine biosynthesis n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AEI1_9ACTN
Thiamine biosynthesis protein {ECO:0000313|EMBL:KKC39657.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
NMT1/THI5 like domain-containing protein; K02051 NitT/TauT family transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_337_curated_25
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24138..25367)
DNA (1230bp) protein (410aa)
Arabinose efflux permease family protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0CBA7_RHILT
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJC80417.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
transmembrane protein
SCNpilot_cont_300_bf_scaffold_337_curated_26
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25604..26512)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00035DC86D
Xylanase {ECO:0000313|EMBL:EPX62735.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_337_curated_27
unknown

Not on your lists

26898..26987
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_337_curated_28
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27496..28371)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VCL1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN88782.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
SCNpilot_cont_300_bf_scaffold_337_curated_29
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28737..30788
DNA (2052bp) protein (684aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source
kdpB; P-type ATPase, high-affinity potassium transport system, B chain, a phophatase-like domain (EC:3.6.3.9)
Potassium-transporting ATPase B chain n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PMU1_9RHIZ
SCNpilot_cont_300_bf_scaffold_337_curated_30
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30801..31370
DNA (570bp) protein (190aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. S
kdpC; potassium-transporting ATPase C chain, KdpC (EC:3.6.3.12); K01548 K+-transporting ATPase ATPase C chain [EC:3.6.3.12]
Potassium-transporting ATPase C chain n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FFW6_9RHIZ
Displaying items 1-30 of 103 in total

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