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SCNpilot_expt_1000_bf_scaffold_363_curated

Search features with annotation key words

Displaying items 31-60 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_363_curated_31
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32329..33681
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HQB8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESZ66606.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_363_curated_32
Mesorhizobium sp. LNJC395A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33800..35026
DNA (1227bp) protein (409aa)
UPI0003CE0481 related cluster n=1 Tax=unknown RepID=UPI0003CE0481
Integrase {ECO:0000313|EMBL:ESY21728.1}; TaxID=1287275 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC395A00.;"
phage integrase
SCNpilot_expt_1000_bf_scaffold_363_curated_33
unknown

Not on your lists

35076..35285
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_363_curated_34
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35255..35551)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Methylocystis rosea RepID=UPI00035EB95A
Uncharacterized protein {ECO:0000313|EMBL:BAQ16686.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_363_curated_35
unknown

Not on your lists

36244..36573
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_363_curated_36
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36629..37636
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B175_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ85340.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_expt_1000_bf_scaffold_363_curated_37
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37636..38661
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B176_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ85341.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_expt_1000_bf_scaffold_363_curated_38

Not on your lists

38661..39869
DNA (1209bp) protein (403aa)
oligogalacturonide lyase (EC:4.2.2.6); K01730 oligogalacturonide lyase [EC:4.2.2.6]
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4U4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKK56358.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_expt_1000_bf_scaffold_363_curated_39
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39866..40705)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Ruania albidiflava RepID=UPI0003B63149
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:EHK85627.1}; TaxID=1114959 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea SZMC 14600.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_363_curated_40
Bacillus clausii, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

40838..42181
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Gracilibacillus lacisalsi RepID=UPI00035C2A1F
sugar ABC transporter substrate-binding protein
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:BAD65805.1}; TaxID=66692 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus clausii (strain KSM-K16).;"
SCNpilot_expt_1000_bf_scaffold_363_curated_41
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

Not on your lists

42181..43140
DNA (960bp) protein (320aa)
Sugar ABC transporter permease n=1 Tax=Bacillus nealsonii AAU1 RepID=R9BZQ7_9BACI
sugar ABC transporter permease
Tax=RIFOXYB2_FULL_RIF07_49_35_curated
SCNpilot_expt_1000_bf_scaffold_363_curated_42
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

Not on your lists

43137..44024
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002EC0538
binding-protein-dependent transporters inner membrane component; K02026 multiple sugar transport system permease protein
Tax=RIFOXYB2_FULL_RIF07_49_35_curated
SCNpilot_expt_1000_bf_scaffold_363_curated_43
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44115..44858
DNA (744bp) protein (248aa)
Transcriptional regulator n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0IV29_MYCSM
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGB22784.1}; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
SCNpilot_expt_1000_bf_scaffold_363_curated_44
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44929..46161
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Paraprevotella xylaniphila YIT 11841 RepID=F3QPW6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:GAO31261.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
SCNpilot_expt_1000_bf_scaffold_363_curated_45
RIFOXYB2_FULL_Elusimicrobia_49_7_curated, Elusimicrobia, Bacteria

Not on your lists

46158..47177
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NGA9_9FIRM
oxidoreductase domain-containing protein
Tax=RIFOXYB2_FULL_Elusimicrobia_49_7_curated
SCNpilot_expt_1000_bf_scaffold_363_curated_46
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47174..48826)
DNA (1653bp) protein (551aa)
Na+/Picotransporter n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B550BC
Na+ cotransporter {ECO:0000313|EMBL:KKB12972.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
Na+/Picotransporter; K03324 phosphate:Na+ symporter
SCNpilot_expt_1000_bf_scaffold_363_curated_47
Mesorhizobium sp. LSHC426A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48837..50300)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HAP1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX45704.1}; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC426A00.;"
xylulokinase
SCNpilot_expt_1000_bf_scaffold_363_curated_48
Mesorhizobium sp. L103C105A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50305..50979)
DNA (675bp) protein (225aa)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GN26_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESZ72556.1}; TaxID=1287074 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C105A0.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_363_curated_49
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50994..52328)
DNA (1335bp) protein (445aa)
UPI0003CEC1C5 related cluster n=1 Tax=unknown RepID=UPI0003CEC1C5
Glycerol 1-phosphate dehydrogenase (L-arabinose utilization protein) protein {ECO:0000313|EMBL:ESZ15518.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_363_curated_50
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52331..53836)
DNA (1506bp) protein (502aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glpD; glycerol-3-phosphate dehydrogenase; K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
glycerol-3-phosphate dehydrogenase n=1 Tax=Xanthobacteraceae RepID=UPI0003654261
SCNpilot_expt_1000_bf_scaffold_363_curated_51
Mesorhizobium sp. L103C565B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53868..54710)
DNA (843bp) protein (281aa)
UPI0003D06515 related cluster n=1 Tax=unknown RepID=UPI0003D06515
HAD family hydrolase {ECO:0000313|EMBL:ESZ45554.1}; TaxID=1287094 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C565B0.;"
HAD family hydrolase; K07024
SCNpilot_expt_1000_bf_scaffold_363_curated_52
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54765..55580)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZZ29_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHM01747.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_363_curated_53
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55577..56584)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003070D48
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit {ECO:0000313|EMBL:EJT03293.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
putative glycerate dehydrogenase
SCNpilot_expt_1000_bf_scaffold_363_curated_54
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56581..57381)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F75E6B
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:EJK78531.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_363_curated_55
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57378..59087)
DNA (1710bp) protein (570aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F85367
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM36004.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
oligopeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_363_curated_56
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59094..60227)
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00036A96BA
Peptide ABC transporter permease {ECO:0000313|EMBL:KKC31465.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein
SCNpilot_expt_1000_bf_scaffold_363_curated_57
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60224..61213)
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI0003669263
ABC transporter permease {ECO:0000313|EMBL:KFL30481.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ABC transporter permease; K02033 peptide/nickel transport system permease protein
SCNpilot_expt_1000_bf_scaffold_363_curated_58
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61274..63052)
DNA (1779bp) protein (593aa)
ABC-type dipeptide transport system component n=5 Tax=Vibrio mimicus RepID=D0GYW4_VIBMI
Uncharacterized protein {ECO:0000313|EMBL:KKC31411.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
dipeptide ABC transporter substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_363_curated_59
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63384..64256)
DNA (873bp) protein (291aa)
RpiR family transcriptional regulator protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5SR91_RHIET
RpiR family transcriptional regulator protein
RpiR family transcriptional regulator protein {ECO:0000313|EMBL:AGS24542.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
SCNpilot_expt_1000_bf_scaffold_363_curated_60
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64272..65018)
DNA (747bp) protein (249aa)
HAD superfamily hydrolase protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5SAN8_RHIET
HAD superfamily hydrolase protein
HAD superfamily hydrolase protein {ECO:0000313|EMBL:AGS24541.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
Displaying items 31-60 of 64 in total

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