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SCNpilot_expt_1000_bf_scaffold_363_curated

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_363_curated_1
unknown

Not on your lists

3..935
DNA (933bp) protein (311aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_363_curated_2
Aspergillus ochraceoroseus, Aspergillus, Eurotiales, Eurotiomycetidae, Ascomycota, Fungi

Not on your lists

1016..1777
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Ceriporiopsis subvermispora (strain B) RepID=M2PJR0_CERS8
UbiE/COQ5 methyltransferase {ECO:0000313|EMBL:KKK18308.1}; TaxID=138278 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus.;" source="Aspergillus ochraceoroseus.;"
methyltransferase, S-adenosyl-L-methionine (SAM)-MTase protein
SCNpilot_expt_1000_bf_scaffold_363_curated_3
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1888..2454
DNA (567bp) protein (189aa)
nitrile hydratase subunit alpha; K01721 nitrile hydratase [EC:4.2.1.84]
Nitrile hydratase, alpha subunit n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UB04_SINMW
Nitrile hydratase {ECO:0000313|EMBL:KJS15735.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
SCNpilot_expt_1000_bf_scaffold_363_curated_4
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2481..3110
DNA (630bp) protein (210aa)
Nitrile hydratase, beta subunit n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VV52_9RHIZ
Nitrile hydratase, beta subunit {ECO:0000313|EMBL:EJN04040.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
nitrile hydratase, beta subunit
SCNpilot_expt_1000_bf_scaffold_363_curated_5
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3097..3441
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031B568C
Uncharacterized protein {ECO:0000313|EMBL:CDX35192.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_363_curated_6
unknown

Not on your lists

comp(3524..3673)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_363_curated_7
unknown

Not on your lists

comp(4141..4479)
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_363_curated_8
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5575..6654)
DNA (1080bp) protein (360aa)
Probable DNA repair protein Rvan_0632 n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3HZV8_RHOVT
Ku protein; K10979 DNA end-binding protein Ku
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;"
SCNpilot_expt_1000_bf_scaffold_363_curated_9
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6941..7576
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HFX0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EPE96965.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_363_curated_10
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7693..8697
DNA (1005bp) protein (335aa)
Transcriptional regulator, LacI family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YGF7_MESOW
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AEH90342.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_363_curated_11
bacterium UASB14, Bacteria

Not on your lists

8859..10610
DNA (1752bp) protein (584aa)
Putative ABC transporter substrate binding protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I7J1_CALAS
Extracellular solute-binding protein, family 5 {ECO:0000313|EMBL:GAK54075.1}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
putative ABC transporter substrate binding protein
SCNpilot_expt_1000_bf_scaffold_363_curated_12
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

10672..11664
DNA (993bp) protein (331aa)
Putative ABC transporter permease protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I7J2_CALAS
ABC transporter permease; K02033 peptide/nickel transport system permease protein
Putative ABC transporter permease protein {ECO:0000313|EMBL:BAM01230.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
SCNpilot_expt_1000_bf_scaffold_363_curated_13
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

11665..12531
DNA (867bp) protein (289aa)
Maltose ABC transporter, permease n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2Q8_THERP
maltose ABC transporter permease; K02034 peptide/nickel transport system permease protein
Maltose ABC transporter, permease {ECO:0000313|EMBL:ACM05736.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
SCNpilot_expt_1000_bf_scaffold_363_curated_14
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

12528..13511
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037BFEE9
putative oligopeptide ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein
Tax=RBG_16_Chloroflexi_54_18_curated
SCNpilot_expt_1000_bf_scaffold_363_curated_15
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13498..14487
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036006C1
ABC transporter {ECO:0000313|EMBL:KGM35067.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
oligopeptide transport ATP-binding protein OppF; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_363_curated_16
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

14506..15594
DNA (1089bp) protein (363aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NMR8_ROSCS
Uncharacterized protein {ECO:0000313|EMBL:AIE83734.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_363_curated_17
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15883..16458)
DNA (576bp) protein (192aa)
malL; oligosaccharide alpha-1,6-glucosidase (EC:3.2.1.93); K01182 oligo-1,6-glucosidase [EC:3.2.1.10]
Oligosaccharide alpha-1,6-glucosidase protein n=1 Tax=Sagittula stellata E-37 RepID=A3K7L2_9RHOB
Oligosaccharide alpha-1,6-glucosidase protein {ECO:0000313|EMBL:EBA06971.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula stellata E-37.;"
SCNpilot_expt_1000_bf_scaffold_363_curated_18
Roseibacterium elongatum, Roseibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16836..17462
DNA (627bp) protein (209aa)
Integrase catalytic region n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MI52_9RHIZ
Mobile element protein {ECO:0000313|EMBL:AHM02475.1}; TaxID=1294273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibacterium.;" source="Roseibacterium elongatum DSM 19469.;"
integrase catalytic subunit
SCNpilot_expt_1000_bf_scaffold_363_curated_19
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17512..18366)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Catenovulum agarivorans RepID=UPI000362DBE3
Uncharacterized protein {ECO:0000313|EMBL:KKB82575.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
LacI family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_363_curated_20
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18707..20020
DNA (1314bp) protein (438aa)
sugar-binding protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B73A02
Multiple sugar-binding protein {ECO:0000313|EMBL:KJL21110.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
putative sugar ABC transporter, substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_363_curated_21
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20097..20981
DNA (885bp) protein (295aa)
sugar ABC transporter permease n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B532EF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE74344.1}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebraskensis NCPPB 2581.;"
SCNpilot_expt_1000_bf_scaffold_363_curated_22
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20978..21865
DNA (888bp) protein (296aa)
sugar ABC transporter permease n=1 Tax=Arthrobacter sp. 161MFSha2.1 RepID=UPI000371BB34
SPG23_c9, whole genome shotgun sequence {ECO:0000313|EMBL:KIS28656.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
yurM3; ABC transporter permease protein YurM
SCNpilot_expt_1000_bf_scaffold_363_curated_23
Exophiala mesophila, Exophiala, Chaetothyriales, Chaetothyriomycetidae, Ascomycota, Fungi

Not on your lists

21889..23352
DNA (1464bp) protein (488aa)
Glycosyl hydrolase family 32 n=1 Tax=Treponema lecithinolyticum ATCC 700332 RepID=U2K3H6_TRELE
Strain CBS 40295 unplaced genomic scaffold supercont1.5, whole genome shotgun sequence {ECO:0000313|EMBL:KIV89829.1}; TaxID=212818 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Chaetothyriomycetidae; Chaetothyriales; Herpotrichiellaceae; Exophiala.;" source="Exophiala mesophila.;"
Beta-fructosidases (levanase/invertase)
SCNpilot_expt_1000_bf_scaffold_363_curated_24
Tolumonas auensis, Tolumonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23349..24719
DNA (1371bp) protein (457aa)
Glycosyl hydrolase family 32 domain-containing protein; K01212 levanase [EC:3.2.1.65]
Glycosyl hydrolase family 32 domain protein n=1 Tax=Tolumonas auensis (strain DSM 9187 / TA4) RepID=C4LCS8_TOLAT
Glycosyl hydrolase family 32 domain protein {ECO:0000313|EMBL:ACQ93741.1}; TaxID=595494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Tolumonas.;" source="Tolumonas auensis (strain DSM 9187 / TA4).;"
SCNpilot_expt_1000_bf_scaffold_363_curated_25
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24690..25739)
DNA (1050bp) protein (350aa)
LacI family transcriptional regulator n=1 Tax=Rhizobium giardinii RepID=UPI00037CAFA0
LacI family transcriptional regulator {ECO:0000313|EMBL:KEC69744.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. phaseoli CCGM1.;"
LacI family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_363_curated_26
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25911..27152
DNA (1242bp) protein (414aa)
Probable sugar ABC transporter, substrate-binding protein n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=Q2K100_RHIEC
sugar ABC transporter, substrate-binding protein
Probable sugar ABC transporter, substrate-binding protein {ECO:0000313|EMBL:ABC93794.1}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CFN 42 / ATCC 51251).;"
SCNpilot_expt_1000_bf_scaffold_363_curated_27
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27228..28106
DNA (879bp) protein (293aa)
sugar ABC transporter permease n=1 Tax=Rhizobium phaseoli RepID=UPI00037EAEBA
Sugar ABC transporter permease protein {ECO:0000313|EMBL:AIC31762.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
sugar ABC transporter permease protein
SCNpilot_expt_1000_bf_scaffold_363_curated_28
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28099..28935
DNA (837bp) protein (279aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhizobium sp. Pop5 RepID=K0W792_9RHIZ
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EJZ22783.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein
SCNpilot_expt_1000_bf_scaffold_363_curated_29
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28942..30309
DNA (1368bp) protein (456aa)
inulin fructotransferase (DFA-I-forming) (EC:4.2.2.17); K10677 inulin fructotransferase (DFA-I-forming) [EC:4.2.2.17]
fructotransferase n=1 Tax=Rhizobium leguminosarum RepID=UPI00037C5E92
Pectin lyase fold/virulence factor domain-containing protein {ECO:0000313|EMBL:AIC31765.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
SCNpilot_expt_1000_bf_scaffold_363_curated_30
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30393..32003
DNA (1611bp) protein (537aa)
beta-fructofuranosidase (EC:3.2.1.26); K01193 beta-fructofuranosidase [EC:3.2.1.26]
Beta-fructofuranosidase {ECO:0000313|EMBL:ACI58923.1}; EC=3.2.1.26 {ECO:0000313|EMBL:ACI58923.1};; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
Beta-fructofuranosidase n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B6A3E0_RHILW
Displaying items 1-30 of 64 in total

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