name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_293_curated_121
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
135279..136178
|
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QPK0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP06971.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_122
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria
|
Not on your lists |
136171..137091
|
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
UPI0003D0137A related cluster n=1 Tax=unknown RepID=UPI0003D0137A
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:KIJ72627.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_123
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
137088..138065
|
Aldo/keto reductase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REI2_PELHB
Aldo/keto reductase {ECO:0000313|EMBL:KKB79502.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
aldo/keto reductase
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_124
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
138145..138513
|
Transcriptional regulator, GntR family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9W6_PELHB
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AEQ52493.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_125
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
138510..139391
|
ABC transporter ATP-binding protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9W7_PELHB
ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AEQ52494.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_126
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
139394..140143
|
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9W8_PELHB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ52495.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_127
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
140241..143159
|
Peptidase M16C associated domain protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCM7_PELHB
Peptidase M16 {ECO:0000313|EMBL:KFL26101.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
peptidase M16C associated domain protein; K06972
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_128
unknown
|
Not on your lists |
143178..144086
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_293_curated_129
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
144156..145874
|
long-chain-fatty-acid--CoA ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
Long-chain-fatty-acid--CoA ligase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA08_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB77146.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_130
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
145861..146259
|
Putative transcriptional regulator LiuR of leucine degradation pathway, MerR family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA09_PELHB
MerR family transcriptional regulator {ECO:0000313|EMBL:KFL26095.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
putative transcriptional regulator LiuR of leucine degradation pathway, MerR family
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_131
bacterium YEK0313, Bacteria
|
Not on your lists |
comp(146219..148432)
|
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA10_PELHB
Oxygen sensor protein DosP {ECO:0000313|EMBL:CEJ14052.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_132
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(148602..148856)
|
UvrB/UvrC protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T4S6_CAUSK
Uncharacterized protein {ECO:0000313|EMBL:CDP52870.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
UvrB/UvrC protein
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_133
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(148856..150433)
|
ATP-dependent DNA ligase LigC; K01971 DNA ligase (ATP) [EC:6.5.1.1]
ATP-dependent DNA ligase LigC n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGY5_PELHB
ATP-dependent DNA ligase {ECO:0000313|EMBL:KFL26099.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_134
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(150430..151428)
|
mRNA 3-end processing factor n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGY4_PELHB
mRNA 3-end processing factor; K07577 putative mRNA 3-end processing factor
mRNA 3-end processing factor {ECO:0000313|EMBL:AEQ53137.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_135
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
152387..154882
|
butyryl-CoA dehydrogenase; K06445 acyl-CoA dehydrogenase [EC:1.3.99.-]
Butyryl-CoA dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA07_PELHB
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KFL26093.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_136
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
154894..156864
|
alpha-subunit of fatty acid oxidation complex; K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
Alpha-subunit of fatty acid oxidation complex n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA06_PELHB
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:KFL26092.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_137
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
156866..158149
|
3-ketoacyl-CoA thiolase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
3-ketoacyl-CoA thiolase / acetyl-CoA acetyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA05_PELHB
3-ketoacyl-CoA thiolase / acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KFC69772.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_138
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
158452..160071
|
peptide ABC transporter substrate-binding protein n=1 Tax=Ruegeria conchae RepID=UPI000237A964
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB79513.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
oppA; periplasmic oligopeptide-binding protein; K15580 oligopeptide transport system substrate-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_139
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
160159..161082
|
Putative oligopeptide ABC transporter, permease protein n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V1C8_9RHOB
Oligopeptide transporter permease {ECO:0000313|EMBL:KKB79514.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
oligopeptide transport system permease OppB; K15581 oligopeptide transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_140
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
161092..162027
|
peptide ABC transporter permease n=1 Tax=Loktanella vestfoldensis RepID=UPI000379CEDC
Peptide ABC transporter permease {ECO:0000313|EMBL:KKC41018.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
oppC; oligopeptide transport system permease OppC; K15582 oligopeptide transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_141
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
162027..163010
|
Oligopeptide transport ATP-binding protein OppD n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA01_PELHB
oligopeptide transport ATP-binding protein OppD; K15583 oligopeptide transport system ATP-binding protein
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:AEQ52528.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_142
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
163007..164023
|
Oligopeptide transport ATP-binding protein OppF n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA00_PELHB
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFL26086.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
oligopeptide transport ATP-binding protein OppF; K10823 oligopeptide transport system ATP-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_143
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(164026..164520)
|
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00035F0AFF
Uncharacterized protein {ECO:0000313|EMBL:KKB10957.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
chemotaxis protein CheY
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_144
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
164709..164834
|
50S ribosomal protein L36 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9Z8_PELHB
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
50S ribosomal protein L36; K02919 large subunit ribosomal protein L36
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_145
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
164981..165382
|
polyketide cyclase n=1 Tax=Herbaspirillum lusitanum RepID=UPI0002F36DB6
Uncharacterized protein {ECO:0000313|EMBL:KFL26083.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_146
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(165455..166849)
|
Acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase-related deacylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6K8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC32637.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase-related deacylase
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_147
Wenxinia marina, Wenxinia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
167147..168547
|
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI0003805659
Wenxma_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ69785.1}; TaxID=1123501 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Wenxinia.;" source="Wenxinia marina DSM 24838.;"
ABC transporter substrate-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_148
Wenxinia marina, Wenxinia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
168681..170642
|
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI00035CDB3B
Wenxma_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ69786.1}; TaxID=1123501 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Wenxinia.;" source="Wenxinia marina DSM 24838.;"
ABC transporter permease
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_149
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
170858..175327
|
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2ML54_9RHIZ
hypothetical protein
rbh
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
|
|
SCNpilot_expt_1000_bf_scaffold_293_curated_150
Streptomyces gancidicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(175363..175977)
|
hypothetical protein n=1 Tax=Streptomyces sp. FxanaD5 RepID=UPI0003669868
Uncharacterized protein {ECO:0000313|EMBL:EMF29417.1}; TaxID=1284664 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces gancidicus BKS 13-15.;"
hypothetical protein
|