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SCNpilot_expt_1000_bf_scaffold_1296_curated_7

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(6500..6976)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreA n=2 Tax=Pseudovibrio RepID=G8PGB3_PSEUV similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 151.0
  • Bit_score: 229
  • Evalue 2.70e-57
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 156.0
  • Bit_score: 245
  • Evalue 6.60e-62
transcription elongation factor GreA domain-containing protein; K03624 transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 151.0
  • Bit_score: 229
  • Evalue 8.40e-58

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Taxonomy

Devosia sp. 17-2-E-8 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGCCGGACAAGATCCCGATGACGCCCAGCGGCCATGTCGCACTCACCGAGGAGTATCGCGTCCGCACGTCCGAGGAACGCCCGCGCATCGTCCGCGACATTGCCGAAGCGCGCGCCCATGGCGACCTCAGCGAGAATGCCGAATATCACGCCGCCAAAGAGCAGCAGAGCCTCAATGAGGGCCGCATCAAGGAGCTGGAATCGCTCCTCGCGCTGGCCGAGATCATCGATGTGAGCAAGCTCTCCGGCTCGACGGTCAAGTTCGGCGCAACGGTCAAGATCGTCGACGAGGACACCGAAAAGGAAGTCAAATACATGATCGTCGGCGACGCCGAGGCGGACGCCGGCAAGGGTCGCATCTCGATTTCCTCGCCCATCGCCCGCGCCCTCATCGGCAAATCCAAGGGCGACAGCGTCGAGGTCCCCGCCCCCGGTGGCACCCGCAGCTACGAGATTCTCGACGTCAGGTTCGTCTAG
PROTEIN sequence
Length: 159
MPDKIPMTPSGHVALTEEYRVRTSEERPRIVRDIAEARAHGDLSENAEYHAAKEQQSLNEGRIKELESLLALAEIIDVSKLSGSTVKFGATVKIVDEDTEKEVKYMIVGDAEADAGKGRISISSPIARALIGKSKGDSVEVPAPGGTRSYEILDVRFV*