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SCNpilot_expt_1000_bf_scaffold_1296_curated_9

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(8179..8391)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein CspA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGU3_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 69.0
  • Bit_score: 127
  • Evalue 6.40e-27
Cold-shock protein {ECO:0000313|EMBL:KKB13441.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 69.0
  • Bit_score: 141
  • Evalue 4.60e-31
cold shock protein CspA; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 69.0
  • Bit_score: 127
  • Evalue 2.00e-27

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Taxonomy

Devosia geojensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 213
ATGGCTACCGGCACTGTTAAATGGTTCAATGGGCAGAAGGGCTACGGCTTCATCCAGCCGGATGAGGGCGGGGCGGATGTGTTCGTGCACATTTCGGCCGTCCAGCGCTCGGGCCTGAATGGCCTCGATGAGGGCCAGAAGGTCAACTACGAGATCGTCAAGGACAAGCGGACCGGCAAGTCTGCTGCCGACAACCTGTCCATGGCTGGCTGA
PROTEIN sequence
Length: 71
MATGTVKWFNGQKGYGFIQPDEGGADVFVHISAVQRSGLNGLDEGQKVNYEIVKDKRTGKSAADNLSMAG*