ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2140_curated_9

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(5799..6728)

Top 3 Functional Annotations

Value Algorithm Source
OmpA family protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LTF2_RUEPO similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 315.0
  • Bit_score: 287
  • Evalue 1.20e-74
OmpA family protein similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 315.0
  • Bit_score: 287
  • Evalue 3.90e-75
OmpA family protein {ECO:0000313|EMBL:AAV94749.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3); (Silicibacter pomeroyi).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 315.0
  • Bit_score: 287
  • Evalue 1.70e-74

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruegeria pomeroyi → Ruegeria → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
GTGCCGGAGGTCCTCGAGACGCCGAGCCCGAGCCAAACGTTCACGCGCGTGGTTGAGGTCTATGGCTCAGTGGCCGGCCCGGGCGCCGGATACGAGCTCCTGGCCTCCGCCACCCTCGCCACGCACGCGGGCAAGGGCGAGGTCACCGAGCTCACCCCGGCCCGTTCGATGGCGGTGAAGTGGGTGAAGCTCCGGCTCGTCGGCGGCATCGACTTGCCAAACGGTCAGGGCTTCCTCGAATTCAGCGAGATCATCGGCAACGGCACCCAGGAGCCGGCCCCGCTGTCGGGCGGCTTCACCGGCGTATGGAAAAAGGGCGCGAACGTCATCCAGCTCTCGCAGGAGGGCGCCGTGGTGTCGGGGTGCTACTACCCCAACGGCGACCTCAACGGGACGGTGACCGGCACCATCCTGCGGGCAACTGGGATCGACCGGTCGGACGGGACGGAGAGTCTTTTCATTCTATCGGTTACGCCGGAAGGCGGCCTGCGTGGCGTGCTGTCGGCCAACGGCGCGCCGTTTCGCCTGCTCGCCACGCCGGTCGCGCCGGCGGGCACCGATCCGGGCTGCGGCGCCGTCGAAGTGAAGCTCGGCTGCGGCTCGGTGATCCACGGCATCAACTTCGACTACGATTCGGCGATTATCCGCCCGGACGCAGAGCCGGTTCTGGCGGCGCTCCATGACGGCCTCCGCGGCGATGGCAGCGCTTCGATCGTCATCGAGGGCCATACGTCGAGCGAGGGATCGGACGCCTACAATCAGGTCCTCTCGGAGCGGCGCGCGCAGTCGGTCGTCGACGATCTCGCACGGCGCGGTATTGACGCGTCACGGCTGAGGGCCGCCGGCGCCGGCGAGAGCCGGCCGATCGCCAGCAACGCCGATGAAAACGGCCGCGCCATGAACCGGCGGGTGGCGGTCGTTTGCAGCTAG
PROTEIN sequence
Length: 310
VPEVLETPSPSQTFTRVVEVYGSVAGPGAGYELLASATLATHAGKGEVTELTPARSMAVKWVKLRLVGGIDLPNGQGFLEFSEIIGNGTQEPAPLSGGFTGVWKKGANVIQLSQEGAVVSGCYYPNGDLNGTVTGTILRATGIDRSDGTESLFILSVTPEGGLRGVLSANGAPFRLLATPVAPAGTDPGCGAVEVKLGCGSVIHGINFDYDSAIIRPDAEPVLAALHDGLRGDGSASIVIEGHTSSEGSDAYNQVLSERRAQSVVDDLARRGIDASRLRAAGAGESRPIASNADENGRAMNRRVAVVCS*