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SCNpilot_expt_1000_bf_scaffold_2140_curated

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2140_curated_1
unknown

Not on your lists

2..205
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2140_curated_2
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169..504)
DNA (336bp) protein (112aa)
UPI0003CFA83A related cluster n=1 Tax=unknown RepID=UPI0003CFA83A
Uncharacterized protein {ECO:0000313|EMBL:ESZ13031.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2140_curated_3
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(501..1169)
DNA (669bp) protein (223aa)
UPI0003D0012E related cluster n=1 Tax=unknown RepID=UPI0003D0012E
Uncharacterized protein {ECO:0000313|EMBL:ESZ13032.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2140_curated_4
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1156..1377)
DNA (222bp) protein (74aa)
UPI0003D0012E related cluster n=1 Tax=unknown RepID=UPI0003D0012E
Uncharacterized protein {ECO:0000313|EMBL:ESZ13032.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2140_curated_5
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1374..1850)
DNA (477bp) protein (159aa)
UPI0003D03294 related cluster n=1 Tax=unknown RepID=UPI0003D03294
Uncharacterized protein {ECO:0000313|EMBL:ESZ13033.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2140_curated_6
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1935..3638)
DNA (1704bp) protein (568aa)
ParB family protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MT2_MESSB
Plasmid partitioning protein {ECO:0000313|EMBL:EXL02100.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
plasmid partitioning protein
SCNpilot_expt_1000_bf_scaffold_2140_curated_7
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3759..4808
DNA (1050bp) protein (350aa)
Putative transposase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YMQ7_MOBAS
Putative transposase {ECO:0000313|EMBL:EAS51324.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
transposase IS116/IS110/IS902 family protein
SCNpilot_expt_1000_bf_scaffold_2140_curated_8
Rhizobium sp. IRBG74, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4805..5308)
DNA (504bp) protein (168aa)
transposase IS3 n=1 Tax=Xanthobacteraceae RepID=UPI00035C5D71
Insertion element ISR1 uncharacterized 10 kDa protein A3
Insertion element ISR1 uncharacterized 10 kDa protein A3 {ECO:0000313|EMBL:CDI12062.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. IRBG74.;"
SCNpilot_expt_1000_bf_scaffold_2140_curated_9
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5799..6728)
DNA (930bp) protein (310aa)
OmpA family protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LTF2_RUEPO
OmpA family protein
OmpA family protein {ECO:0000313|EMBL:AAV94749.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3); (Silicibacter pomeroyi).;"
SCNpilot_expt_1000_bf_scaffold_2140_curated_10
unknown

Not on your lists

comp(6673..7032)
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2140_curated_11
unknown

Not on your lists

7231..8325
DNA (1095bp) protein (365aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2140_curated_12
unknown

Not on your lists

comp(8318..8461)
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2140_curated_13
unknown

Not on your lists

comp(8703..8993)
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2140_curated_14
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9025..9240)
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000369C246
UDP-glucose 4-epimerase {ECO:0000313|EMBL:KGM34040.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
SCNpilot_expt_1000_bf_scaffold_2140_curated_15
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9732..10763
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00031AB6F9
hypothetical protein rbh
Blr8069 protein {ECO:0000313|EMBL:BAC53334.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
Displaying 15 items

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