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SCNpilot_expt_1000_bf_scaffold_362_curated_33

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(26973..28244)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PG64_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 412.0
  • Bit_score: 560
  • Evalue 1.80e-156
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EPX63370.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 412.0
  • Bit_score: 560
  • Evalue 2.50e-156
ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 414.0
  • Bit_score: 550
  • Evalue 4.40e-154

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Taxonomy

Cystobacter fuscus → Cystobacter → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1272
ATGGACAAGCTCAGCCCCCAATTCGCCACTCAGCGCGCGGTCGAGGCCGTCTGGCGCATCGAAGCCGCCAAGCTGATCGCCGGTTTGACCAAGATGACGCGCGACGTCGGGCTTGCCGAAGAACTGGCCAGCGACGCGCTGGTGGTTGCCTTGCAGCAATGGCCGGAGAGCGGCATCCCGAACAATCCCGGTGCGTGGTTGATGCAGAGCGCCAAGCGCCGGGCCATCGACCAGTTCCGCCGCAACAAGGTGATGTCGGAAAAGGCGATGCCCGAGCTGACGCATCAGGCGGAGCTCCAGGAACAGGAGGCGCCCGATTATGACGAGCGCCTCGACGACGATGTGAAGGACAACGTGCTCAGCCTGATCTTCACCGCCTGCCATCCGATCCTCAGCGCCGACGCCCGCGCCGCGCTGACGCTTCGGCTCGTCGGCGGCCTGACCACGGCGGAGATCGCCCGCGCCTATCTCGTGCCGGAGCCGACCATCCAGCAGCGCATCGTTCGCGCCAAGAAGACGCTGGCGGATGCCAAAGTCCCCTTCGAGGTGCCGCGCGGCGAGGAGCGACTGGCGCGCCTCGGATCGGTGCTCGAGGTGCTCTATCTCATTTTCAACGAGGGCTATTCGGCAACCGCCGGTTCCGATTGGATGCGCACCGAACTGTGCGACGAGGCCCTTCGTGTCGGCCGCATTCTCGCCAACCTCGCGCCGGACGAGCCGGAGGTCCATGGCCTCGTCTCGCTGATGGAGATTCAGGCGTCGCGCAGCAATGCGCGCACCGCCAGGGACGGCACGCCGATCCTGCTGCTCGACCAGGATCGGAGCAAATGGAACCAGATTCTGATCCGGCGCGGCCTTGCCGCGCTCGAGCAGGCTGCCACCCTTGATGGACTTCGTGGTCCGTACGCGCTGCAGGCAGCCATCGCGGCATGCCACGCGCGCGCCGGTCGCCCCGGCGATACCGACTGGAGGCGGATCGTCGCGCTTTACGACGAGCTGGCGATGGTCACGCCGTCGCCCATCATCGAGCTCAACCGCGCCGTCGCCTATGCGATGGCATATGGACCGGAGGCGGGGCTGCGCGTGCTCGAGCCGATCATGGATGCGCCGCAGCTGCGCAACTACCACCTCCTGCCCAGCGTGCGCGGCGACTTCCTCGCCCGGCTCGGTCGCCATGACGAAGCCCGTGCCGAGTTCGCACGTGCCGCCGGCATGACGCAGAACGAGCAGGAGAGGGCGCTTCTGCTCAAGCGCGCTTCGGGACAGGCATGA
PROTEIN sequence
Length: 424
MDKLSPQFATQRAVEAVWRIEAAKLIAGLTKMTRDVGLAEELASDALVVALQQWPESGIPNNPGAWLMQSAKRRAIDQFRRNKVMSEKAMPELTHQAELQEQEAPDYDERLDDDVKDNVLSLIFTACHPILSADARAALTLRLVGGLTTAEIARAYLVPEPTIQQRIVRAKKTLADAKVPFEVPRGEERLARLGSVLEVLYLIFNEGYSATAGSDWMRTELCDEALRVGRILANLAPDEPEVHGLVSLMEIQASRSNARTARDGTPILLLDQDRSKWNQILIRRGLAALEQAATLDGLRGPYALQAAIAACHARAGRPGDTDWRRIVALYDELAMVTPSPIIELNRAVAYAMAYGPEAGLRVLEPIMDAPQLRNYHLLPSVRGDFLARLGRHDEARAEFARAAGMTQNEQERALLLKRASGQA*