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SCNpilot_expt_1000_bf_scaffold_1286_curated_14

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(12900..13268)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC17_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 122.0
  • Bit_score: 225
  • Evalue 2.30e-56
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 122.0
  • Bit_score: 242
  • Evalue 4.30e-61
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 122.0
  • Bit_score: 225
  • Evalue 7.20e-57

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Taxonomy

Devosia geojensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
GTGGCTCGTATCGCTGGCGTCAATATTCCGACGAACAAGCGTGTGGTTATTGCGCTGCAATACATCCACGGCATCGGCGACAAGTTCGCCGAGGACATCTGCACGAAGGTGGGGATTCCCGCCGAGCGTCGCGTCAATGAGTTGACCGACGCCGAAGTCATCCAGATCCGCGAGACCATCGACCGCGACTATGTCGTGGAGGGCGACCTCCGCCGCAACGTGGCGATGAACATCAAGCGGCTCATGGACCTCGGCAATTATCGTGGCCTGCGCCACCGCCGTGGTCTGCCGGTCCGCGGTCAGCGCACGCACACCAACGCGCGCACCCGCAAGGGCCCGGCCAAGCCGATCGCCGGCAAGAAGAAGTAA
PROTEIN sequence
Length: 123
VARIAGVNIPTNKRVVIALQYIHGIGDKFAEDICTKVGIPAERRVNELTDAEVIQIRETIDRDYVVEGDLRRNVAMNIKRLMDLGNYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGKKK*