ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1286_curated_13

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(12425..12817)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S11 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC16_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 130.0
  • Bit_score: 242
  • Evalue 3.30e-61
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 130.0
  • Bit_score: 252
  • Evalue 2.60e-64
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 similarity KEGG
DB: KEGG
  • Identity: 92.3
  • Coverage: 130.0
  • Bit_score: 242
  • Evalue 1.00e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
TTGGCAAAAGCTGAAGGCGCGCGCGTAAAGCGCAAAGAGCGCAAGAACATCACGTCCGGCGTCGCACATGTGAACGCCAGCTTCAACAACACCATGGTGACCATCACCGACGTTCAGGGCAACACGATTTCGTGGTCCTCGTCGGGCGTCATGGGGTTCAAGGGATCGCGCAAGTCGACCCCGTACGCCGCTCAGGTTGCGGCGGAAGATGCGGCAAAGAAGGCCCAGGAACACGGCATGAAGACCCTCGAGGTCGAAGTGCGCGGTCCGGGCTCGGGCCGTGAATCGGCGCTCCGCGCCCTCCAGGCAGCCGGCTTCAACGTCACGTCGATCCGCGACGTCACGTCGATCCCCCACAATGGCTGCCGGCCGCGCAAGCGCCGCCGCGTCTGA
PROTEIN sequence
Length: 131
LAKAEGARVKRKERKNITSGVAHVNASFNNTMVTITDVQGNTISWSSSGVMGFKGSRKSTPYAAQVAAEDAAKKAQEHGMKTLEVEVRGPGSGRESALRALQAAGFNVTSIRDVTSIPHNGCRPRKRRRV*